Table 1 Chromosome locations and peptide sequences of SlCLEs uncovered in this study
From: Deeper genomic insights into tomato CLE genes repertoire identify new active peptides
Name | Predicted CLEp | Chromosome | Start | End |
|---|---|---|---|---|
CLE1 | RQIPTGPDPLHH(N) | 1 | 11619943 | 11620437 |
CLE2 | REVPSSPDPLHN | 1 | 81529230 | 81529475 |
CLE3 | RRVPSEPDPIHN | 2 | 35723792 | 35724463 |
CLE4 | RRVPTGPNAIHN | 2 | 47936570 | 47937280 |
CLE5 | HLVPGGPNPLHN | 3 | 3374293 | 3374493 |
CLE6 | RRVPNGPDPIHN | 5 | 1311175 | 1313680 |
CLE7 | RKVRKGSDPIHN | 5 | 2204552 | 2204803 |
CLE8 | HDVPSGANPVQN | 5 | 63087495 | 63087764 |
CLE9 | REAPMSPDPLHH(H) | 6 | 43447059 | 43447467 |
CLE10 | RVVPGGPDSQHH | 7 | 61751575 | 61751838 |
CLE11 | RVAPQGPDAQHH | 7 | 65194792 | 65195058 |
CLE12 | HEVPSGPNPISN | 9 | 55141751 | 55142068 |
CLE13 | HEVPSGANPESN | 9 | 67120505 | 67120768 |
CLE14 | HKPPSGPNPNGN(H) | 11 | 49841730 | 49842297 |
CLE15 | RGVPAGPDPLHH(N) | 11 | 52945095 | 52945649 |
CLE16 | HDVPAGPSPSHN | 1 | 6946626 | 6946868 |
CLE17 | HDVPAGPSPSHN | 1 | 7005125 | 7005367 |
CLE18 | HDVPAGPSPSHN | 1 | 7027437 | 7027679 |
CLE19 | RRVPNGPDPIHN | 1 | 7704510 | 7706013 |
CLE20 | RVSPGGPDPHHH | 2 | 40195502 | 40195723 |
CLE21 | RVAPGGPDPQHH(N) | 2 | 40204594 | 40204857 |
CLE22 | HEVPSGPNPISN | 2 | 43800735 | 43801028 |
CLE23 | RLVPSGPNPLHN | 3 | 3376485 | 3376727 |
CLE24 | RRVKRGSDPIHN | 3 | 59983924 | 59984208 |
CLE25 | RLVPTGPNPLHH | 3 | 62820859 | 62821140 |
CLE26 | RLVHTGPNPLHN | 4 | 1449560 | 1449838 |
CLE27 | RRVPNESDPLHN | 4 | 61069201 | 61069419 |
CLE28 | RRVPSCPDPLHN | 5 | 3515405 | 3515701 |
CLE29 | RLVPTGPNPLHH | 5 | 4183891 | 4184229 |
CLE30 | RSIPSGPNPLHN | 5 | 5853919 | 5854191 |
CLE31 | RLVPSGPNPLHN | 5 | 5856133 | 5856446 |
CLE32 | RRVPTGSNPLHN | 5 | 53722541 | 53722744 |
CLE33 | HDVPSGPNSPIH | 5 | 63089819 | 63090067 |
CLE34 | RRVPTGPNPLHN | 7 | 59399859 | 59400098 |
CLE35 | RRSPGGPDPKHH | 7 | 61762724 | 61762957 |
CLE36 | RLSPGGPDPKHH | 7 | 65205136 | 65205351 |
CLE37 | REVPTGPDPLHH(H) | 8 | 4071288 | 4071515 |
CLE38 | RIVPGGPNPLHN | 8 | 62042236 | 62042481 |
CLE39 | HDVPTGPSPSHN | 9 | 60775375 | 60775638 |
CLE40 | RLSPGGPDPRHH | 10 | 1482971 | 1483189 |
CLE41 | RLSPRGPNPKHH | 10 | 1486893 | 1487168 |
CLE42 | RVAPGGPDPKHH | 10 | 2690033 | 2690287 |
CLE43 | RTAPTGPSPIHH | 10 | 11338810 | 11339245 |
CLE44 | RTVPAVPNPIHH | 10 | 11387275 | 11387445 |
CLE45 | RKVRTGPNPLHN | 10 | 61194096 | 61194368 |
CLE46 | RTVPTGPNPIHH | 11 | 15143289 | 15143555 |
CLE47 | RTVPTGPNPIHH | 11 | 15193925 | 15194191 |
CLE48 | RRIPTGSNPLHN | 12 | 744075 | 744296 |
CLE49 | RISPGGPDPKHH | 12 | 3799102 | 3799443 |
CLE50 | RLSPGGPDPRHH | 12 | 5056108 | 5056338 |
CLE51 | HAVPGGPNPLHN | 12 | 61900450 | 61900707 |
CLE52 | HSVPSGPNPESN | 12 | 65362393 | 65362674 |