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Table 1 LncRNA targets differential genes

From: Analysis of long non-coding RNA expression profile of bovine monocyte-macrophage infected by Mycobacterium avium subsp. paratuberculosis

mRNA

  

lncRNA

    

gene name

chr

Description

gene id

chr

class code

cis/trans

cis location

CYP1B1

chr11

cytochrome P450 family 1 subfamily B member 1

MSTRG.2049

chr11

u

cis

10 K

IMPA1

chr14

inositol monophosphatase 1

MSTRG.4384

chr14

x

cis

100 K

FXR2

chr19

fragile X mental retardation syndrome-related protein 2

MSTRG.7505

chr19

u

cis

10 K

ECE1

chr2

endothelin converting enzyme 1

MSTRG.8917

chr2

u

cis

100 K

BHLHE41

chr5

basic helix-loop-helix family member e41

MSTRG.15575

chr5

u

cis

100 K

IL-8

chr6

Interleukin-8

MSTRG.16271

chr6

u

cis

100 K