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Fig. 4 | BMC Genomics

Fig. 4

From: Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle

Fig. 4

A) Three-dimensional scatter plot showing effect estimates for milk volume, CSF2RB gene expression and H3K4Me3 peak (chr5:75,278,382–75,280,245) height for 1446 sequence variants. Variant P-values of association are indicated by colour. Variants that were in the top 80% (ranked by beta) for all three QTL are circled in green. B) The same data visualised by Manhattan plots, showing location details of associated variants, boundaries of the H3K4Me3 mark, and the CSF2RB gene. In these plots, P-value is represented on the Y-axis, with colour indicating variant beta-estimates. Variants that were in the top 80% (ranked by beta) for all three QTL are circled in green

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BMC Genomics

ISSN: 1471-2164

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