Table 3 The overlap between peaks or exons with significant dSNPs (odds ratio in brackets) and the number of peaks/exons with shared significant dSNPs (p < 0.0001) as well as the number of peaks where the direction of the SNP effect was the same in both hQTL and asbQTL analysis. Also the number of exons where the direction of the SNP effect was the same in both eeQTL and aseQTL analysis
| Â | Peaks tested in both | Peaks with significant asbQTL | Peaks with significant hQTL | Overlap | Overlapping peaks with shared significant dSNPs | Peaks with hQTL and asbQTL effects in the same direction |
|---|---|---|---|---|---|---|
H3K4Me3 | 224,183 | 15,918 | 14,816 | 3656 (OR = 5.26) | 1981 | 1975 |
H3K4Me1 | 220,588 | 20,555 | 18,840 | 4706 (OR = 3.9) | 2395 | 2375 |
H3K27ac | 283,232 | 7963 | 5943 | 243 (OR = 1.5) | 59 | 59 |
| Â | Exons tested in both | Exons with significant aseQTL | Exons with significant eeQTL | Overlap | Overlapping exons with shared significant dSNPs | Exons with eeQTL and aseQTL effects in the same direction |
RNA | 48,456 | 15,308 | 25,163 | 10,678 (OR = 2.97) | 6733 | 6676 |