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Table 4 The number of SNPs identified in both aseQTL and asbQTL analyses (odds ratio in brackets) and the percentage where the direction of the SNP effect was the same

From: Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle

 

Total dSNPs tested

aseQTL

asbQTL

Overlap

Same direction of SNP effect (%)

H3K4Me3

13,397,022

1,999,869

1,055,069

410,022 (OR = 4.3)

61.5

H3K4Me1

981,026

339,821 (OR = 3.4)

57.4

H3K27ac

154,739

53,829 (OR = 3.1)

66