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Table 5 The number of SNPs identified as both eeQTL and hQTL (odds ratio in brackets) and the percentage where the direction of the SNP effect was the same

From: Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle

 

Total dSNPs tested

eeQTL

hQTL

Overlap

Same direction of SNP effect (%)

H3K4Me3

13,397,022

5,402,049

1,234,995

783,358 (OR = 2.8)

58.9

H3K4Me1

1,840,063

1,082,690 (OR = 2.4)

63.3

H3K27ac

346,175

120,207 (OR = 0.8)

59.9