Table 1 Expression of genes involved in Calvin cycle and photorespiration pathway in two Shanlan upland rice lines (SL1 and SL10) under DS
Gene ID | log2FC (SL1 DS vs CK) | log2FC (SL10 DS vs CK) | Swiss-Prot_annotation |
|---|---|---|---|
Photorespiration | |||
 LOC4345962 | 1.22 | 0.08 | SGA1.a, Serine-glyoxylate aminotransferase 1 |
 LOC4326980 | 1.71 | 0.68 | DLDH1, Dihydrolipoyl dehydrogenase 1 |
 LOC4348728 | 1.36 | 0.19 | GLYK, Phosphoglycerate kinase activity |
 LOC107277781 | 1.36 | −0.25 | GYD1, Glyoxylate reductase |
 LOC4327981 | 1.21 | 0.47 | HPR1, Glycerate dehydrogenase HPR |
Carbon and nitrogen assimilation | |||
 LOC4341496 | −1.91 | 1.06 | FBA5, Fructose-bisphosphate aldolase 5 |
 LOC4341770 | −1.13 | 1.14 | FBP1, Fructose-1,6-bisphosphatase |
 LOC4345685 | −1.63 | 1.15 | GAP3, Glyceraldehyde-3-phosphate dehydrogenase |
 LOC4351966 | −2.28 | −0.62 | RBCS1, Ribulose bisphosphate carboxylase small chain |
 LOC4334316 | −1.82 | 1.11 | RPI1, Ribose-5-phosphate isomerase 4 |
 LOC4327400 | −1.67 | −0.67 | TPIC, Triosephosphate isomerase |
 LOC4333564 | −2.56 | −0.07 | TRK1, Pyruvate dehydrogenase E1 |
 LOC4330649 | −1.39 | −0.24 | GST1, glutamine synthetase cytosolic isozyme 1 |