Fig. 3
From: Stochastic nuclear organization and host-dependent allele contribution in Rhizophagus irregularis
Allele frequencies in different Rhizophagus irregularis isolates. Only biallelic SNPs were considered in all samples, where both reference and alternative alleles were observed at least 10 times. a DAOM197198, mapped to Rir17 [19] (coverage between 355 and 455). b A4 reads [20] mapped to the RirC3 assembly (coverage between 75 and 125). RirC3 was chosen as the reference genome since the mapping rate of A4 Illumina reads was higher with this assembly. c C3 Illumina reads mapped to the RirC3 assembly (coverage between 85 and 135). d MAT locus proportions based on coverage of the MAT loci in A4 and C3 Illumina reads mapped against the RirC3 assembly