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Table 1 The number of differentially methylated regions (DMRs) during seed ripening and germination

From: Contribution of RdDM to the ecotype-specific differential methylation on conserved as well as highly variable regions between Arabidopsis ecotypes

 

CG

CHG

CHH

 

R&G

FH

AR

GS

R&G

FH

AR

GS

R&G

FH

AR

GS

Total

58,923

66,565

65,382

65,820

22,647

40,812

38,969

45,516

77,406

134,631

127,451

137,852

Gene

49,205

54,651

54,182

54,319

5933

7775

7366

7592

13,981

20,497

19,341

19,227

Gene&TE

464

558

535

532

452

788

732

810

1760

2740

2673

2750

TE

4212

5234

4883

5193

9988

22,260

21,266

26,700

37,089

73,208

67,778

77,278

IGR

5042

6122

5782

5776

6274

9989

9605

10,414

24,576

38,186

37,659

38,597

  1. The size of a window is 50 bp without overlap. R&G, continuous DMR during seed ripening and germination
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BMC Genomics

ISSN: 1471-2164

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