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Table 2 GC-content of six SSR Motifs in five maize genomes

From: Pattern and variation in simple sequence repeat (SSR) at different genomic regions and its implications to maize evolution and breeding

Genome

GC content (%)

Mononucleotide

Dinucleotide

Trinucleotide

Tetranucleotide

Pentanucleotide

Hexanucleotide

B73

64.10

19.36

46.48

36.53

53.50

55.68

W22

55.87

17.18

46.27

37.33

54.98

56.95

SK

65.15

19.46

46.57

38.07

54.26

55.53

PE0075

60.42

18.92

46.17

37.66

53.17

56.04

LT2357

62.72

19.59

42.09

36.23

53.70

55.43

AVG

61.65

18.90

45.52

37.16

53.92

55.92

CV (%)

5.98

5.25

4.23

2.07

1.32

1.10

  1. AVG Average, CV Coefficient of variation
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BMC Genomics

ISSN: 1471-2164

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