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Table 1 Primers information used in the study

From: miR-330 targeting BCO2 is involved in carotenoid metabolism to regulate skin pigmentation in rainbow trout (Oncorhynchus mykiss)

Primers

Sequence (5' to 3')

Application

BCO2-F

CGTGGTGTTTATTGAGCAGCC

qRT-PCR

BCO2-R

GGCTTTGGCGTGATACTTGACT

qRT-PCR

β-actin-F

TGGGGCAGTATGGCTTGTATG

qRT-PCR

β-actin-R

CTCTGGCACCCTAATCACCTCT

qRT-PCR

BCO2-5′outer

GATTACGCCAAGCTTGGTTTTCTGGCGTTGTCTTTGTCGGA

5′RACE

BCO2-3′outer

GATTACGCCAAGCTTCGCTACTTCTACGGTTGCGGTTTCAG

3′RACE

BCO2-3′inter

GATTACGCCAAGCTTAAGGTGTGGGAGCATCCTGGACTGTA

3′RACE

UPMlong

CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT

5′RACE/3′RACE

UPMshort

CTAATACGACTCACTATAGGGC

5′RACE/3′RACE

MiR-330

TTTATTAGCAAAGCACAGGGCCTGC

qRT-PCR

U6-F

GCTTCGGCAGCACATATACTAAAAT

qRT-PCR

U6-R

CGCTTCACGAATTTGCGTGTCAT

qRT-PCR

MiR-330 mimics

GCAAAGCACAGGGCCUGCAGAGA

Overexpression in vitro

UCUGCAGGCCCUGUGCUUUGCUU

mimics NC

UUCUCCGAACGUGUCACGUTT

Control of miR-330 mimics

ACGUGACACGUUCGGAGAATT

MiR-330 inhibitor

UCUCUGCAGGCCCUGUGCUUUGC

Downexpression in vitro

inhibitor NC

CAGUACUUUUGUGUAGUACAA

Control of miR-330 inhibitor

agomiR-330

GCAAAGCACAGGGCCUGCAGAGA

Overexpression in vivo

UCUGCAGGCCCUGUGCUUUGCUU

agomiR-330 NC

UUCUCCGAACGUGUCACGUTT

Control of agomiR-330

ACGUGACACGUUCGGAGAATT