Table 1 Number of differentially expressed genes (DEGs), Gene Ontology (GO) enriched terms and pathways annotated among up- and downregulated DEGs in the different comparisons between treatments (T) and control (C)
Comparison | Up-reg DEGs | Down-reg DEGs | GO terms enriched in up-reg. DEGs | GO terms enriched in down-reg. DEGs | Pathway occurrence in up-reg. DEGs | Pathway occurrence in down-reg. DEGs |
|---|---|---|---|---|---|---|
T2 vs C2 | 4838 | 388 | 469 | 142 | 160 | 14 |
T3 vs C2 | 11,704 | 3851 | 704 | 494 | 351 | 187 |
T4 vs C2 | 13,851 | 4801 | 699 | 549 | 429 | 181 |