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Table 2 The top 10 most over (a) and under (b) expressed genes at the different sampling points (T2, T3, T4) versus control (C2). The transcript ID, the SwissProt ID and function are reported together with the log2(FC) for the different comparisons

From: Gene expression during the formation of resting spores induced by nitrogen starvation in the marine diatom Chaetoceros socialis

a) TRANSCRIPT ID

SwissProt_ID

SwissProt_function

T2vsC2

T3vsC2

T4vsC2

TRINITY_DN4348_c0_g1_i3

Q9FGQ7

Cyclin-D3-2

5.11

13.57

14.31

TRINITY_DN725_c0_g1_i4

Q53FA7

Quinone oxidoreductase PIG3

4.77

13.03

13.73

TRINITY_DN339_c0_g1_i5

Q7S045

Non-histone chromosomal protein 6

5.44

13.01

13.68

TRINITY_DN2312_c0_g1_i11

Q8BWU8

Ethanolamine-phosphate phospho-lyase

4.76

12.99

14.16

TRINITY_DN1112_c0_g1_i2

P30041

Peroxiredoxin-6

-

12.98

-

TRINITY_DN2429_c0_g1_i6

Q9NP80

Calcium-independent phospholipase A2-gamma

4.99

12.57

13.43

TRINITY_DN2494_c0_g1_i2

Q9FK72

Heat stress transcription factor A

5.54

12.56

14.01

TRINITY_DN195_c0_g1_i4

Q9FM67

Protein TIC 20-v, chloroplastic

5.89

12.46

13.81

TRINITY_DN790_c0_g1_i6

F4K2K3

ARF guanine-nucleotide exchange factor GNL2

-

12.40

12.95

TRINITY_DN1629_c0_g1_i2

P40301

Proteasome subunit alpha type-2

5.39

12.09

12.67

b) TRANSCRIPT ID

SwissProt_ID

SwissProt_function

T2vsC2

T3vsC2

T4vsC2

TRINITY_DN247_c0_g1_i1

Q9LXH0

High affinity nitrate transporter 2.6

-

-11.55

-12.20

TRINITY_DN2228_c0_g1_i3

O14283

Transcription factor prr1

-

-8.28

-4.52

TRINITY_DN22327_c0_g1_i7

B4JTF5

Protein hedgehog

-

-8.27

-6.87

TRINITY_DN7356_c0_g1_i1

Q02073

20 kDa chaperonin, chloroplastic

-

-8.26

-2.17

TRINITY_DN80_c0_g1_i2

Q7Z8P9

Nucleoside diphosphate kinase

-

-8.03

-3.52

TRINITY_DN32657_c0_g1_i1

P49534

Uncharacterized protein ycf39

-

-7.71

-3.28

TRINITY_DN20497_c0_g1_i1

Q9LYR5

Peptidyl-prolyl cis–trans isomerase, chloroplastic

-

-7.17

-3.84

TRINITY_DN4637_c0_g1_i6

O80832

UPF0187 protein, chloroplastic

-

-7.17

-3.23

TRINITY_DN22327_c0_g1_i3

Q98862

Indian hedgehog B protein

-

-7.09

-6.44

TRINITY_DN262_c0_g1_i3

Q4ING3

Cytochrome c peroxidase, mitochondrial

-

-7.02

-3.90

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BMC Genomics

ISSN: 1471-2164

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