Table 1 Characteristics of the CP genomes
From: Analysis of the chloroplast genome and phylogenetic evolution of Bidens pilosa
Species | Bidens pilosa | Bidens bipinnata | Bidens alba |
|---|---|---|---|
Total length(bp) | 154,478 | 151,611 | 151,599 |
LSC.length(bp) | 84,170 | 84,240 | 83,856 |
SSC.length(bp) | 17,780 | 18,439 | 18,439 |
IR.length(bp) | 26,264 | 24,245 | 24,652 |
CDS.length(bp) | 76,044 | 76,674 | 77,109 |
CDS length/Total length (%) | 49.23 | 50.57 | 50.86 |
Genes number | 129 | 129 | 130 |
Protein-coding genes | 86 | 85 | 86 |
tRNA genes | 35 | 36 | 36 |
rRNA genes | 8 | 8 | 8 |
Intron-containing genes | 16 | 14 | 15 |
LSC.GC (%) | 35.64 | 35.59 | 35.56 |
SSC.GC (%) | 31.34 | 30.97 | 30.97 |
IR.GC (%) | 42.42 | 43.21 | 43.14 |
Total GC (%) | 37.52 | 37.48 | 37.46 |
CDS.AT1 (%) | 54.49 | 54.45 | 54.41 |
CDS.AT2 (%) | 61.90 | 61.85 | 61.83 |
CDS.AT3 (%) | 70.15 | 70.11 | 70.09 |