Table 1 Functional classification and pathway assignment of seed dormancy/germination-related genes by GO
GO ID | Gene ID | log2Ratio(S30/CK) | log2Ratio(S60/CK) | log2Ratio(S90/CK) |
|---|---|---|---|---|
GO:0009793 embryo development ending in seed dormancy | Â | Â | Â | Â |
Transcription factor HBP-1b(c38)-like | Unigene35675_At_Mix | -1.54037 | -1.93607 | -1.30578 |
Auxin-repressed 12.5Â kDa protein-like | Unigene933_At_Mix | 1.530515 | 2.485427 | 2.751321 |
Transcription initiation factor TFIID | CL4011.Contig1_At_Mix | 0.579668 | 0.271378 | 1.622061 |
Peptidyl-prolyl cis-trans isomerase PASTICCINO1 | CL7831.Contig2_At_Mix | 0.635844 | 1.547488 | 2.086157 |
Leucine–tRNA ligase | Unigene12495_At_Mix | 1.521397 | -0.95109 | 1.572472 |
Leucine–tRNA ligase | Unigene15613_At_Mix | 0.817136 | 1.947533 | 2.918295 |
AMP deaminase-like | Unigene22288_At_Mix | -5.24793 | 1.658963 | 2.484523 |
Glutamate carboxypeptidase 2 | Unigene27835_At_Mix | -0.45519 | 0.491476 | 2.086464 |
SKP1-like protein 1B | Unigene39191_At_Mix | -0.54946 | -0.9446 | 1.606198 |
GO:0009845 seed germination | Â | Â | Â | Â |
GEM-like protein 5 | CL3614.Contig1_At_Mix | -0.25211 | -0.868 | -1.31374 |
Polypyrimidine tract-binding protein homolog 1-like | Unigene14359_At_Mix | 1.354431 | -6.30378 | 1.111257 |