Table 4 Correlated differentially expression transcripts/proteins for the comparison
| Â | Gene name | Expression pattern | Transcript.ID | Protein.ID |
|---|---|---|---|---|
Plant hormone signal transduction | Â | Â | Â | Â |
Indole-3-acetic acid-amido synthetase GH3.5 | GH3.5 | positive | CL4276.Contig5_At_Mix | Gene.19270_CL4276.Contig5_At_Mix |
Starch and sucrose metabolism | Â | Â | Â | Â |
Amyloplastic | WAXY | negative | Unigene35857_At_Mix | Gene.62705_Unigene35857_At_Mix |
Alpha,alpha-trehalose-phosphate synthase | TPS | positive | CL4726.Contig3_At_Mix | Gene.21036_CL4726.Contig3_At_Mix |
Sucrose-phosphate synthase 1 | SPS1 | negative | Unigene6303_At_Mix | Gene.43277_Unigene6303_At_Mix |
Sucrose synthase 2 | SS2 | negative | Unigene6964_At_Mix | Gene.43938_Unigene6964_At_Mix |
Glycolysis / Gluconeogenesis | Â | Â | Â | Â |
Pyruvate decarboxylase 2 | PDC2 | negative | CL5048.Contig2_At_Mix | Gene.22274_CL5048.Contig2_At_Mix |
Enolase 1 | ENO1 | positive | Unigene1780_At_Mix | Gene.38591_Unigene1780_At_Mix |
Aldehyde dehydrogenase family 2 member B | ALDH2B7 | positive | Unigene26001_At_Mix | Gene.56044_Unigene26001_At_Mix |
Plastidial pyruvate kinase 2 | PKP2 | negative | CL5395.Contig2_At_Mix | Gene.23557_CL5395.Contig2_At_Mix |
glyoxysomal | ACS | negative | CL4713.Contig1_At_Mix | Gene.20984_CL4713.Contig1_At_Mix |
Citrate cycle (TCA cycle) | Â | Â | Â | Â |
Malate dehydrogenase | MMDH | positive | Unigene27705_At_Mix | Gene.57253_Unigene27705_At_Mix |
ATP-citrate synthase alpha chain protein 3 | ACLA-3 | positive | Unigene16500_At_Mix | Gene.50017_Unigene16500_At_Mix |
Fatty acid metabolism | Â | Â | Â | Â |
2-methylacyl-CoA dehydrogenase | 2MBCD | negative | Unigene13091_At_Mix | Gene.47938_Unigene13091_At_Mix |
Long chain acyl-CoA synthetase 4 | LACS4 | negative | CL8918.Contig2_At_Mix | Gene.34208_CL8918.Contig2_At_Mix |
3-ketoacyl-CoA thiolase 2 | PED1 | negative | CL1166.Contig2_At_Mix | Gene.5647_CL1166.Contig2_At_Mix |
Peroxisomal acyl-coenzyme A oxidase 1 | ACX1 | negative | CL2195.Contig2_At_Mix | Gene.10506_CL2195.Contig2_At_Mix |
Peroxisomal fatty acid beta-oxidation multifunctional protein | MFP | negative | Unigene31449_At_Mix | Gene.59650_Unigene31449_At_Mix |
Transcription factors | Â | Â | Â | Â |
Splicing factor U2af small subunit B | U2AF35B | positive | CL4942.Contig6_At_Mix | Gene.21902_CL4942.Contig6_At_Mix |
Glycine-rich protein 2 | GRP2 | positive | Unigene33171_At_Mix | Gene.60880_Unigene33171_At_Mix |
Mitochondrial transcription termination factors | mTERF | negative | Unigene8826_At_Mix | Gene.45456_Unigene8826_At_Mix |
Zinc finger protein | C2H2 | positive | Unigene27716_At_Mix | Gene.57265_Unigene27716_At_Mix |
Cell wall protein | Â | Â | Â | Â |
Expansin-A4 | EXPA4 | positive | CL4237.Contig1_At_Mix | Gene.19114_CL4237.Contig1_At_Mix |
Expansin-A4 | EXPA4 | positive | CL7306.Contig1_At_Mix | Gene.29591_CL7306.Contig1_At_Mix |
Heat shock protein | Â | Â | Â | Â |
Heat shock protein 81 − 1 | HSP81-1 | negative | CL2198.Contig1_At_Mix | Gene.10515_CL2198.Contig1_At_Mix |
Heat shock protein 81 − 1 | HSP81-1 | negative | CL2198.Contig2_At_Mix | Gene.10518_CL2198.Contig2_At_Mix |
Heat shock protein 81 − 1 | HSP81-1 | negative | CL2198.Contig3_At_Mix | Gene.10521_CL2198.Contig3_At_Mix |
Heat shock protein 81 − 1 | HSP81-1 | negative | Unigene2709_At_Mix | Gene.39539_Unigene2709_At_Mix |
Heat shock protein 81 − 1 | HSP81-1 | negative | Unigene6699_At_Mix | Gene.43667_Unigene6699_At_Mix |
Heat shock protein 82 | HSP82 | negative | CL8907.Contig2_At_Mix | Gene.34182_CL8907.Contig2_At_Mix |
Seed dormancy and germination proteins | Â | Â | Â | Â |
ASPARTIC PROTEASE IN GUARD CELL 1 | ASPG1 | negative | Unigene27450_At_Mix | Gene.57088_Unigene27450_At_Mix |
ASPARTIC PROTEASE IN GUARD CELL 1 | ASPG1 | negative | CL1058.Contig2_At_Mix | Gene.5014_CL1058.Contig2_At_Mix |
ASPARTIC PROTEASE IN GUARD CELL 2 | ASPG2 | positive | CL2169.Contig1_At_Mix | Gene.10399_CL2169.Contig1_At_Mix |