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Table 2 Summary statistics of the strictly filtered linkage map and the forced order linkage map for T. cryptogamus

From: A genetic linkage map and improved genome assembly of the termite symbiont Termitomyces cryptogamus

Strictly filtered data

Forced order

Linkage Group

# of markers

Genetic length (cM)

Longest interval (cM)

Physical length (Mb)

Length between markers (Mb)

Linkage Group

# of markers

Genetic length (cM)

Longest inter-marker gap (cM)

Physical length (Mb)

Length between markers (Mb)

Start putative telomere

End putative telomere

LG1

117

66.9

19.7

3.97

2.48

LG1

167

71.6

18.2

3.98

3.35

Yes

Yes

LG2

154

149.8

34.6

8.02

7.08

LG2

217

156.8

21.6

8.02

7.08

No

Yes

LG3

74

41.4

14.6

4.76

4.56

LG3b

195

122.7

43.2

4.16

4.07

No

No

LG4

99

117.2

35.7

3.97

3.32

LG4

135

95.5

22.7

3.97

3.41

No

No

LG5

131

67.6

24.0

3.85

2.69

LG5_LG11

241

98.9

35.2

5.80

5.24

No

No

LG6

157

142.3

28.4

5.77

5.75

LG6

254

128.4

22.7

5.77

5.75

Yes

No

LG7

29

39.5

18.7

4.86

1.62

LG7_LG8

152

139.8

21.6

6.41

5.52

Ribo

Yes

LG8

93

77.9

24.9

1.55

2.95

LG9

202

108.0

18.2

5.32

4.89

Yes

No

LG9

174

126.9

24.8

5.32

4.81

LG10_TIG058

154

89.8

18.2

4.65

4.27

Yes

No

LG10

38

15.4

7.3

4.22

1.02

LG12

234

130.7

19.3

7.80

7.49

No

Yes

LG11

64

12.0

6.4

1.96

1.88

LG13

119

121.6

34.1

5.39

4.68

Yes

Yes

LG12

210

140.1

22.5

7.80

7.49

LG14

96

62.5

18.2

3.38

2.99

No

No

LG13

77

104.3

23.8

5.39

4.31

LG15

63

44.3

18.2

2.01

1.70

No

Yes

Total:

1417

1101.3

 

61.44

49.96

Total:

2229

1370.4

 

66.66

60.44

  

Average genome-wide recombination rate (cM/Mb)a:

22.0

Average genome-wide recombination rate (cM/Mb)a:

22.7

  
  1. aRatio of total genetic to total physical map-length indicates an average genome-wide recombination rate