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Table 1 Sequence characteristics and physicochemical parameter of LEA genes in the P. notoginseng genome

From: Genome-wide identification and characterization of members of the LEA gene family in Panax notoginseng and their transcriptional responses to dehydration of recalcitrant seeds

Name

Gene ID

Subfamily

Amino acid number

KDa

pI

 GRAVY

Subcellular Localization

PnoLEA1

Pno01G004215.t1

LEA_2

317

34.38

9.94

-0.319

Chloroplast

PnoLEA2

Pno01G005297.t1

LEA_2

218

24.35

9.77

-0.229

Nuclear

PnoLEA3

Pno01G005299.t1

LEA_2

222

24.92

10.04

-0.228

Chloroplast

PnoLEA4

Pno01G006107.t1

LEA_2

269

30.65

10.23

-0.087

Chloroplast

PnoLEA5

Pno01G006785.t1

LEA_2

236

26.86

9.53

-0.222

Plasma membrane

PnoLEA6

Pno01G006787.t1

LEA_2

202

22.61

10.04

0.151

Chloroplast

PnoLEA7

Pno01G006789.t1

LEA_2

202

22.83

9.94

0.145

Vacuole

PnoLEA8

Pno01G006795.t1

LEA_2

203

23.09

9.64

0.021

Cytoplasmic

PnoLEA9

Pno01G006807.t1

LEA_2

295

33.09

5.59

-0.399

Golgi

PnoLEA10

Pno01G008106.t1

LEA_1

106

10.97

9.26

-0.923

Nuclear

PnoLEA11

Pno01G008452.t1

LEA_2

199

21.78

9.66

-0.025

Chloroplast

PnoLEA12

Pno01G014208.t1

Dehydrin

225

25.17

4.93

-1.25

Nuclear

PnoLEA13

Pno02G003087.t1

Dehydrin

842

94.29

5.25

-0.264

Cytoplasmic

PnoLEA14

Pno02G004186.t1

LEA_2

200

21.59

9.84

0.335

Chloroplast

PnoLEA15

Pno02G005420.t1

LEA_2

310

34.50

9.69

-0.461

Plasma membrane

PnoLEA16

Pno02G006729.t1

SMP

347

37.84

5.98

-0.379

Cytoplasmic

PnoLEA17

Pno02G007168.t1

LEA_2

252

28.40

10.21

-0.113

Cytoplasmic

PnoLEA18

Pno02G009256.t1

LEA_2

251

27.51

10.57

-0.191

Chloroplast

PnoLEA19

Pno02G011491.t1

LEA_2

306

33.94

10.04

-0.288

Chloroplast

PnoLEA20

Pno02G011751.t1

LEA_2

213

23.96

5.94

0.017

Cytoplasmic

PnoLEA21

Pno03G004189.t1

LEA_2

188

20.64

9.37

0.383

Chloroplast

PnoLEA22

Pno03G004228.t1

LEA_2

193

22.22

9.64

-0.291

Extracellular

PnoLEA23

Pno04G002202.t1

LEA_2

257

28.93

10.18

-0.165

Cytoplasmic

PnoLEA24

Pno04G003855.t1

LEA_2

252

28.48

9.9

-0.202

Cytoplasmic

PnoLEA25

Pno04G005051.t1

LEA_2

316

35.77

7.65

0.251

Plasma membrane

PnoLEA26

Pno04G013501.t1

LEA_2

200

21.72

9.33

0.276

Mitochondrial matrix

PnoLEA27

Pno05G001957.t1

LEA_2

224

24.98

9.41

0.05

Cytoplasmic

PnoLEA28

Pno05G003675.t2

LEA_2

258

28.52

10.17

-0.152

Cytoplasmic

PnoLEA29

Pno05G003676.t1

LEA_2

208

23.63

8.91

0.097

Cytoplasmic

PnoLEA30

Pno05G003722.t1

LEA_2

181

19.63

6.1

0.356

Chloroplast

PnoLEA31

Pno05G003884.t1

LEA_2

201

22.96

9.97

-0.066

Chloroplast

PnoLEA32

Pno05G016210.t1

Dehydrin

865

100.10

5.26

-1.323

Nuclear

PnoLEA33

Pno05G017027.t1

LEA_5

113

12.33

9.6

-1.35

Nuclear

PnoLEA34

Pno06G000531.t1

LEA_2

185

20.19

4.72

0.145

Chloroplast

PnoLEA35

Pno06G001741.t1

LEA_2

201

22.50

9.37

-0.012

Chloroplast

PnoLEA36

Pno06G003570.t1

Dehydrin

164

17.59

9.32

-0.818

Nuclear

PnoLEA37

Pno06G003782.t1

LEA_2

208

23.64

8.34

0.015

Cytoplasmic

PnoLEA38

Pno06G004111.t1

LEA_2

227

25.48

9.77

0.025

Cytoplasmic

PnoLEA39

Pno06G012644.t1

SMP

185

18.63

4.8

-0.189

Cytoplasmic

PnoLEA40

Pno06G013284.t1

LEA_2

205

23.25

9.32

0.088

Cytoplasmic

PnoLEA41

Pno06G013403.t1

LEA_2

192

21.38

9.55

-0.173

Cytoplasmic

PnoLEA42

Pno07G003203.t1

LEA_2

522

57.82

8.83

-0.039

Chloroplast

PnoLEA43

Pno07G003687.t1

Dehydrin

135

14.23

9.49

-0.851

Chloroplast

PnoLEA44

Pno07G005621.t1

LEA_2

195

21.18

9.71

0.359

Cytoplasmic

PnoLEA45

Pno08G002349.t1

LEA_2

225

25.21

9.76

0.389

Chloroplast

PnoLEA46

Pno08G002530.t1

LEA_2

257

27.86

10.29

-0.144

Chloroplast

PnoLEA47

Pno08G004154.t1

LEA_2

320

35.55

4.66

-0.355

Cytoplasmic

PnoLEA48

Pno08G004310.t1

LEA_3

179

18.57

5.04

0.101

Endoplasmic reticulum

PnoLEA49

Pno09G001128.t1

LEA_2

210

23.47

9.62

0.12

Cytoplasmic

PnoLEA50

Pno09G001130.t1

LEA_2

240

27.29

9.65

-0.159

Plasma membrane

PnoLEA51

Pno09G001376.t1

LEA_4

180

18.86

5.32

-0.933

Mitochondrial matrix

PnoLEA52

Pno09G002674.t1

LEA_2

211

23.65

9.79

-0.073

Golgi

PnoLEA53

Pno10G009339.t1

LEA_2

211

23.39

9.3

-0.245

Cytoskeleton

PnoLEA54

Pno12G000411.t1

Dehydrin

192

19.89

8.51

-1.2

Nuclear

PnoLEA55

Pno12G009463.t1

SMP

203

21.41

5.66

-0.799

Nuclear

PnoLEA56

Pno13G000968.t1

LEA_1

142

15.71

5.38

-1.151

Nuclear

PnoLEA57

Pno13G001626.t1

LEA_2

153

16.64

5.15

-0.029

Endoplasmic reticulum

PnoLEA58

Pno13G001773.t1

LEA_2

230

25.06

9.49

-0.081

Cytoplasmic

PnoLEA59

Pno14G001256.t1

LEA_2

318

34.56

9.94

-0.376

Chloroplast

PnoLEA60

Pno16G001656.t1

LEA_2

318

35.39

4.65

-0.323

Cytoskeleton

PnoLEA61

Pno16G002334.t1

SMP

116

12.27

6.05

-0.37

Cytoplasmic