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Table 2 Complete D-loop region of the mtDNA diversity between the two of Sudan desert sheep and crossbreed

From: Genetic variation and demographic history of Sudan desert sheep reveal two diversified lineages

Breed

N

Hap-A

Hap-B

S

H

Hd (SD)

π (SD)

K (SD)

D

Fs

SSD

(P-value)

‘r’

(P-value)

Hamary

72

12

60

151

64

0.996 (0.003)

0.018 (0.009)

21.415

(9.555)

-1.088

(0.127)

-24.064 (0.000)

0.012 (0.100)

0.004 (0.770)

Kabashi

25

5

20

100

24

0.997

(0.009)

0.019

(0.009)

22.160

(10.103)

-0.73

(0.241)

-7.561

(0.007)

0.018

(0.310)

0.015

(0.270)

Crossbreed

23

1

22

78

17

0.968

(0.006)

0.011

(0.006)

13.130

(6.135)

-1.569

(0.041)

-3.298

(0.099)

0.008

(0.390)

0.020

(0.440)

Total

120

18

102

         
  1. N, sample size; S, number of polymorphic sites; H, number of haplotypes; Hd, haplotype diversity; π, nucleotide diversity; K, average number of nucleotide differences; SD, standard deviation. D, Tajima’s D; Fs, Fu’s Fs; SSD, Sum of square deviation, ‘r’, Harpending’s raggedness index