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Fig. 3 | BMC Genomics

Fig. 3

From: High-resolution structural variants catalogue in a large-scale whole genome sequenced bovine family cohort data

Fig. 3

Direct genotyping approach and results

(A) A schematic overview on primer design. To genotype a deletion, a forward assay can target A (marked with red) in the reference, whereas T will be targeted in deletion carriers. A reverse assay can target G (marked with blue), whereas C will be targeted in deletion carriers. (B) Site frequency spectra of CNVs and SNPs obtained from the validation data (50 K SNP genotyping array)

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