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Table 1 Overview of CNGC genes in S. spontaneum

From: Genome-wide identification and expression analysis of the cyclic nucleotide-gated ion channel (CNGC) gene family in Saccharum spontaneum

Name

ID

Chr.

Position

CDS Length (bp)

Protein Length (aa)

No. of Intron

No. of Exon

WM (kDa)

pI

GRAVY

SsCNGC1

Sspon.04G0014070-1A

Chr4A

51882842–51906635

2193

731

9

10

83.41

9.25

-0.128

SsCNGC2

Sspon.08G0008040-1P

Chr8A

31202765–31214757

2478

826

10

11

94.52

9.49

-0.197

SsCNGC3

Sspon.04G0014080-1A

Chr4A

51908179–51911281

1197

399

2

3

46.04

8.78

-0.201

SsCNGC4

Sspon.05G0022360-1B

Chr5B

3204292–3211306

2007

717

7

8

81.74

9.09

-0.08

SsCNGC5

Sspon.01G0024280-1A

Chr1A

87156289–87158432

2106

702

1

2

80.32

9.44

-0.112

SsCNGC6

Sspon.02G0031610-1A

Chr2A

115677914–115680169

2256

752

0

1

85.28

9.53

-0.204

SsCNGC7

Sspon.04G0002010-1A

Chr4A

6199865–6205159

2106

702

5

6

79.98

9.04

-0.04

SsCNGC8

Sspon.08G0012670-1A

Chr8A

54096149–54100723

2043

681

6

7

78.67

9.07

-0.148

SsCNGC9

Sspon.02G0036020-1B

Chr2B

22343268–22348277

2133

711

6

7

82.06

9.12

-0.23

SsCNGC10

Sspon.04G0024390-1B

Chr4B

19113351–19116208

2268

756

5

6

87.71

9.23

-0.094

SsCNGC11

Sspon.04G0008000-1A

Chr4A

22519276–22521836

2076

692

4

5

80.26

9.53

-0.098

SsCNGC12

Sspon.04G0031130-1C

Chr4C

7104138–7112895

2235

745

11

12

85.28

9.04

-0.159

SsCNGC13

Sspon.01G0049590-1B

Chr1B

113439670–113443089

2805

934

5

6

102.30

9.19

-0.106

SsCNGC14

Sspon.03G0005320-1A

Chr3A

15234428–15236678

1512

504

5

6

57.22

9.79

-0.019

SsCNGC15

Sspon.03G0030490-1B

Chr3B

21205167–21206785

915

305

3

4

34.84

10.24

-0.302

SsCNGC16

Sspon.07G0004720-1A

Chr7A

12173890–12175659

1473

491

2

3

55.39

9.86

-0.051

  1. MW Molecular weight, pI the theoretical isoelectric point, GRAVY the grand average of hydropathicity