Table 2 Statistics of the transcriptomic sequencing data of M. nipponense in the HRFI and LRFI groups
Group | Sample | No. Rawreads / M | Raw Bases /G | No. clean Reads / M | Clean Bases /G | Valid Bases /% | Q30 /% | GC /% |
|---|---|---|---|---|---|---|---|---|
HRFI | Hepatopancreas_1 | 38.49 | 5.77 | 37.59 | 5.54 | 95.98 | 94.17 | 44.11 |
Hepatopancreas_2 | 46.05 | 6.91 | 44.98 | 6.63 | 96.02 | 94.33 | 44.44 | |
Hepatopancreas_3 | 44.67 | 6.70 | 43.77 | 6.46 | 96.43 | 94.66 | 44.69 | |
Muscle_1 | 42.18 | 6.33 | 41.43 | 6.12 | 96.75 | 94.92 | 44.89 | |
Muscle_2 | 44.93 | 6.74 | 43.92 | 6.48 | 96.12 | 93.99 | 44.90 | |
Muscle_3 | 47.57 | 7.13 | 46.72 | 6.91 | 96.79 | 94.99 | 44.99 | |
LRFI | Hepatopancreas_1 | 48.15 | 7.22 | 47.21 | 6.96 | 96.42 | 94.03 | 47.73 |
Hepatopancreas_2 | 46.81 | 7.02 | 45.90 | 6.74 | 96.01 | 91.35 | 49.13 | |
Hepatopancreas_3 | 41.52 | 6.23 | 40.67 | 6.01 | 96.45 | 93.80 | 49.22 | |
Muscle_1 | 43.71 | 6.56 | 42.88 | 6.33 | 96.56 | 93.99 | 49.53 | |
Muscle_2 | 46.03 | 6.90 | 44.94 | 6.61 | 95.78 | 93.25 | 49.59 | |
Muscle_3 | 48.60 | 7.29 | 47.59 | 7.02 | 96.25 | 93.51 | 49.59 |