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Table 2 The top 20 differentially expressed genes

From: Transcriptome-wide analysis of RNA m6A methylation regulation of muscle development in Queshan Black pigs

Gene name

Fold change

Regulation

Locus

Strand

P-adj

ACBD7

270.63

up

chr10, 46,740,585–46,750,606

 + 

0.00

ETNPPL

205.15

up

Chr8, 113,363,049–113,384,783

 + 

0.00

PVALB

157.04

up

chr5, 10,955,491–10,973,289

 + 

0.00

ENSSSCG00000044722

148.78

up

chr13, 75,843,255–75,845,051

 + 

0.00

PIP4K2C

138.18

up

chr5, 22,854,137–22,867,037

 + 

0.00

ENSSSCG00000033029

131.34

up

chr4, 86,919,184–86,929,920

 + 

0.00

ASB14

117.16

up

chr13, 39,123,650–39,146,914

 − 

0.00

ENSSSCG00000045624

81.99

up

chr1, 30,776,427–30,802,130

 + 

0.00

ENSSSCG00000047072

76.60

up

chr8, 3,764,912–3,769,144

 − 

0.00

SERPINB11

61.84

up

chr1, 158,015,718–158,030,763

 − 

0.00

IL18BP

0.00

Down

chr9, 6,488,808–6,591,333

 + 

0.00

PCK2

0.00

Down

chr7, 75,187,194–75,197,733

 − 

0.00

RXFP2

0.00

Down

chr11, 8,266,716–8,321,022

 + 

0.00

TRPV3

0.00

Down

chr12. 49,635,927–49,671,613

 − 

0.00

STK33

0.00

Down

chr9, 786,509–936,723

 + 

0.00

SLC6A13

0.00

Down

chr5, 67,577,197–67,612,681

 − 

0.00

CPLX1

0.01

Down

chr8, 197,881–232,038

 − 

0.00

ADAMTS19

0.01

Down

chr2, 132,145,389–132,409,915

 + 

0.00

ACTC1

0.01

Down

chr1, 136,281,167–136,286,545

 + 

0.00

SLF2

0.01

Down

chr14, 111,996,760–112,068,251

 + 

0.00