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Table 3 Comparison of CPPVec (Human-Model), CPPred, CPAT, CPC2, and PLEK on Zebrafish-Testing

From: CPPVec: an accurate coding potential predictor based on a distributed representation of protein sequence

Method

SP(%)

SN(%)

PRE(%)

ACC(%)

F-score

AUC

MCC

PLEK

88.48

90.48

91.99

89.67

0.912

0.962

0.787

CPC2

89.95

96.28

93.34

93.71

0.948

0.965

0.869

CPAT

85.53

98.51

90.87

93.24

0.945

0.964

0.862

CPPred

93.75

95.55

95.72

94.82

0.956

0.979

0.893

CPPVec

93.57

98.34

95.72

96.40

0.970

0.990

0.926

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BMC Genomics

ISSN: 1471-2164

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