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Table 4 Comparison of CPPVec (Human-Model), CPPred, CPAT, CPC2, and PLEK on S.cerevisiae-Testing

From: CPPVec: an accurate coding potential predictor based on a distributed representation of protein sequence

Method

SP(%)

SN(%)

PRE(%)

ACC(%)

F-score

AUC

MCC

PLEK

99.03

46.92

98.73

49.94

0.638

0.946

0.216

CPC2

100

88.41

100

89.08

0.938

0.983

0.554

CPAT

100

83.23

100

84.20

0.908

0.969

0.473

CPPred

99.76

86.24

99.98

87.02

0.926

0.990

0.515

CPPVec

100

93.97

100

92.23

0.957

0.994

0.626