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Table 1 Summary of 11 scRNA-seq datasets used for differentially expressed gene identification

From: scMEB: a fast and clustering-independent method for detecting differentially expressed genes in single-cell RNA-seq data

Datasets

Organism

Cells (n)

Genes (n)

Classes (n)

Publication

hESC

Human

446

48981

8

[19]

PBMC

Human

3994

15716

8

[24]

Human Liver

Human

8444

20007

11

[25]

Kumar

Mouse

246

45159

3

[20]

Kidney

Mouse

519

23341

5

[26]

Liver

Mouse

714

23341

5

[26]

Limb Muscle

Mouse

1090

23341

6

[26]

Pancreas

Mouse

1564

23341

9

[26]

Lung

Mouse

1716

23341

11

[26]

Heart

Mouse

4365

23341

7

[26]

Marrow

Mouse

5037

23341

22

[26]

  1. hESC: human embryogenic stem cell;
  2. PBMC: peripheral blood mononuclear cell
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BMC Genomics

ISSN: 1471-2164

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