Skip to content


BMC Genomics

Eukaryote microbial genomics

Section edited by Gustavo Goldman

This section covers the structure and function of genomes of single-celled parasites, yeasts, fungi and viruses.

Previous Page Page 1 of 28 Next Page
  1. Content type: Research article

    Black Aspergilli represent one of the most important fungal resources of primary and secondary metabolites for biotechnological industry. Having several black Aspergilli sequenced genomes should allow targetin...

    Authors: Elodie Choque, Christophe Klopp, Sophie Valiere, José Raynal and Florence Mathieu

    Citation: BMC Genomics 2018 19(Suppl 2):200

    Published on:

  2. Content type: Research article

    Cryptocaryon irritans is an obligate parasitic ciliate protozoan that can infect various commercially important mariculture fish species and cause high lethality and economic loss. Current methods of controlling ...

    Authors: Ruanni Chen, Yong Mao, Jun Wang, Min Liu, Ying Qiao, Libing Zheng, Yongquan Su, Qiaozhen Ke and Weiqiang Zheng

    Citation: BMC Genomics 2018 19(Suppl 2):192

    Published on:

  3. Content type: Research article

    Aspergillus arachidicola is an aflatoxigenic fungal species, first isolated from the leaves of a wild peanut species native to Argentina. It has since been reported in maize, Brazil nut and human sputum samples. ...

    Authors: Geromy G. Moore, Brian M. Mack, Shannon B. Beltz and Olivier Puel

    Citation: BMC Genomics 2018 19:189

    Published on:

  4. Content type: Research article

    The volatile metabolites produced by Saccharomyces cerevisiae during alcoholic fermentation, which are mainly esters, higher alcohols and organic acids, play a vital role in the quality and perception of fermente...

    Authors: Matthias Eder, Isabelle Sanchez, Claire Brice, Carole Camarasa, Jean-Luc Legras and Sylvie Dequin

    Citation: BMC Genomics 2018 19:166

    Published on:

  5. Content type: Research article

    The size of the phenotypic effect of a gene has been thoroughly investigated in terms of fitness and specific morphological traits in the budding yeast Saccharomyces cerevisiae, but little is known about gross mo...

    Authors: Godai Suzuki, Yang Wang, Karen Kubo, Eri Hirata, Shinsuke Ohnuki and Yoshikazu Ohya

    Citation: BMC Genomics 2018 19:149

    Published on:

  6. Content type: Database

    Euplotes, a ciliated protozoan, is a useful unicellular model organism. Studies on Euplotes have provided excellent insights into various basic biological principles. We have recently sequenced the macronuclear g...

    Authors: Ruan-lin Wang, Wei Miao, Wei Wang, Jie Xiong and Ai-hua Liang

    Citation: BMC Genomics 2018 19:63

    Published on:

  7. Content type: Research article

    The Ceratocystis genus harbors a large number of phytopathogenic fungi that cause xylem parenchyma degradation and vascular destruction on a broad range of economically important plants. Ceratocystis cacaofunesta

    Authors: Eddy Patricia Lopez Molano, Odalys García Cabrera, Juliana Jose, Leandro Costa do Nascimento, Marcelo Falsarella Carazzolle, Paulo José Pereira Lima Teixeira, Javier Correa Alvarez, Ricardo Augusto Tiburcio, Paulo Massanari Tokimatu Filho, Gustavo Machado Alvares de Lima, Rafael Victório Carvalho Guido, Thamy Lívia Ribeiro Corrêa, Adriana Franco Paes Leme, Piotr Mieczkowski and Gonçalo Amarante Guimarães Pereira

    Citation: BMC Genomics 2018 19:58

    Published on:

  8. Content type: Research article

    Agrocybe aegerita is an agaricomycete fungus with typical mushroom features, which is commercially cultivated for its culinary use. In nature, it is a saprotrophic or facultative pathogenic fungus causing a white...

    Authors: Deepak K. Gupta, Martin Rühl, Bagdevi Mishra, Vanessa Kleofas, Martin Hofrichter, Robert Herzog, Marek J. Pecyna, Rahul Sharma, Harald Kellner, Florian Hennicke and Marco Thines

    Citation: BMC Genomics 2018 19:48

    Published on:

  9. Content type: Research article

    The early phases of Diaporthe helianthi pathogenesis on sunflower are characterized by the production of phytotoxins that may play a role in host colonisation. In previous studies, phytotoxins of a polyketidic na...

    Authors: Michelina Ruocco, Riccardo Baroncelli, Santa Olga Cacciola, Catello Pane, Maurilia Maria Monti, Giuseppe Firrao, Mariarosaria Vergara, Gaetano Magnano di San Lio, Giovanni Vannacci and Felice Scala

    Citation: BMC Genomics 2018 19:27

    Published on:

  10. Content type: Research article

    Pleurotus tuoliensis (Bailinggu) is a commercially cultivated mushroom species with an increasing popularity in China and other Asian countries. Commercial profits are now low, mainly due to a low yield, long cul...

    Authors: Wei Gao, Jibin Qu, Jinxia Zhang, Anton Sonnenberg, Qiang Chen, Yan Zhang and Chenyang Huang

    Citation: BMC Genomics 2018 19:18

    Published on:

  11. Content type: Research article

    Brassica plant species are attacked by a number of pathogens; among them, the ones with a soil-borne lifestyle have become increasingly important. Verticillium stem stripe caused by Verticillium longisporum is on...

    Authors: Johan Fogelqvist, Georgios Tzelepis, Sarosh Bejai, Jonas Ilbäck, Arne Schwelm and Christina Dixelius

    Citation: BMC Genomics 2018 19:14

    Published on:

  12. Content type: Research article

    Long non protein coding RNAs (lncRNAs) have been identified in many different organisms and cell types. Emerging examples emphasize the biological importance of these RNA species but their regulation and funct...

    Authors: Ibrahim Avi Cemel, Nati Ha, Geza Schermann, Shusuke Yonekawa and Michael Brunner

    Citation: BMC Genomics 2017 18:978

    Published on:

  13. Content type: Research article

    The lytic cycle of the protozoan parasite Toxoplasma gondii, which involves a brief sojourn in the extracellular space, is characterized by defined transcriptional profiles. For an obligate intracellular parasite...

    Authors: Musa A. Hassan, Juan J. Vasquez, Chew Guo-Liang, Markus Meissner and T. Nicolai Siegel

    Citation: BMC Genomics 2017 18:961

    Published on:

  14. Content type: Research Article

    Avian poxviruses are important pathogens of both wild and domestic birds. To date, seven isolates from subclades A and B and one from proposed subclade E, have had their genomes completely sequenced. The genom...

    Authors: Olivia Carulei, Nicola Douglass and Anna-Lise Williamson

    Citation: BMC Genomics 2017 18:947

    Published on:

  15. Content type: Research article

    Aspergillus fumigatus is a human fungal pathogen that causes aspergillosis in immunocompromised hosts. A. fumigatus is believed to be exposed to diverse environmental stresses in the h...

    Authors: Hiroki Takahashi, Yoko Kusuya, Daisuke Hagiwara, Azusa Takahashi-Nakaguchi, Kanae Sakai and Tohru Gonoi

    Citation: BMC Genomics 2017 18:942

    Published on:

  16. Content type: Research article

    The Aspergillus niger genome contains a large repertoire of genes encoding carbohydrate active enzymes (CAZymes) that are targeted to plant polysaccharide degradation enabling A. niger to grow on a wide range of ...

    Authors: Birgit S. Gruben, Miia R. Mäkelä, Joanna E. Kowalczyk, Miaomiao Zhou, Isabelle Benoit-Gelber and Ronald P. De Vries

    Citation: BMC Genomics 2017 18:900

    Published on:

  17. Content type: Research article

    Downy mildew, caused by the oomycete pathogen Sclerospora graminicola, is an economically important disease of Gramineae crops including foxtail millet (Setaria italica). Plants infected with S. graminicola are g...

    Authors: Michie Kobayashi, Yukie Hiraka, Akira Abe, Hiroki Yaegashi, Satoshi Natsume, Hideko Kikuchi, Hiroki Takagi, Hiromasa Saitoh, Joe Win, Sophien Kamoun and Ryohei Terauchi

    Citation: BMC Genomics 2017 18:897

    Published on:

  18. Content type: Research article

    Trichophyton mentagrophytes is an important zoonotic dermatophytic (ringworm) pathogen; causing severe skin infection in humans and other animals worldwide. Fortunately, commonly used ...

    Authors: Xinke Zhang, Pengxiu Dai, Yongping Gao, Xiaowen Gong, Hao Cui, Yipeng Jin and Yihua Zhang

    Citation: BMC Genomics 2017 18:888

    Published on:

Previous Page Page 1 of 28 Next Page

2016 Journal Metrics

Portable peer review

The editors of BMC Genomics support initiatives that expedite the peer review process and are happy to consider manuscripts that have been reviewed in Peerage of Science. Please indicate in your cover letter if this applies to your manuscript.

Space creator