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  1. Incubation behaviour, an instinct for natural breeding in poultry, is strictly controlled by the central nervous system and multiple neuroendocrine hormones and neurotransmitters, and is closely associated wit...

    Authors: Zhi Chen, Di Wen, Yan Zhang, Jiaying Chen, Fengqian Pan, Wen Zhang, Shuangshuang Zhou, Fen Wang and Ren Mu
    Citation: BMC Genomics 2024 25:309
    Content type: Research Published on:

  2. Flowering at the right time is a very important factor affecting the stable annual yield of longan. However, a lack of knowledge of the regulatory mechanism and key genes of longan flowering restricts healthy ...

    Authors: Dengwei Jue, Zhexin Li, Wenlin Zhang, Jianmin Tang, Ting Xie, Xuelian Sang and Qigao Guo
    Citation: BMC Genomics 2024 25:308
    Content type: Research Published on:

  4. Poplar anthracnose, which is one of the most important tree diseases, is primarily caused by Colletotrichum gloeosporioides, which has been detected in poplar plantations in China and is responsible for serious e...

    Authors: Fei Xing, Linxuan Zhang, Wei Ge, Haixia Fan, Chengming Tian and Fanli Meng
    Citation: BMC Genomics 2024 25:306
    Content type: Research Published on:

  6. Fusarium, a member of the Ascomycota fungi, encompasses several pathogenic species significant to plants and animals. Some phytopathogenic species have received special attention due to their negative economic im...

    Authors: Daniel A. Gomez-Chavarria, Alvaro L. Rua-Giraldo and Juan F. Alzate
    Citation: BMC Genomics 2024 25:304
    Content type: Research Published on:

  7. A fine balance of feto-maternal resource allocation is required to support pregnancy, which depends on interactions between maternal and fetal genetic potential, maternal nutrition and environment, endometrial...

    Authors: Agnes Bonnet, Lisa Bluy, Laure Gress, Laurianne Canario, Laure Ravon, Aurelie Sécula, Yvon Billon and Laurence Liaubet
    Citation: BMC Genomics 2024 25:303
    Content type: Research Published on:

  9. Iron deficiency (ID) during the fetal-neonatal period results in long-term neurodevelopmental impairments associated with pervasive hippocampal gene dysregulation. Prenatal choline supplementation partially no...

    Authors: Shirelle X. Liu, Aarthi Ramakrishnan, Li Shen, Jonathan C. Gewirtz, Michael K. Georgieff and Phu V. Tran
    Citation: BMC Genomics 2024 25:301
    Content type: Research Published on:

  10. The Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq) utilizes the Transposase Tn5 to probe open chromatic, which simultaneously reveals multiple transcription factor binding sites (TFBSs)...

    Authors: Shuangquan Zhang, Xiaotian Wu, Zhichao Lian, Chunman Zuo and Yan Wang
    Citation: BMC Genomics 2024 25:300
    Content type: Research Published on:

  11. Many studies have been performed to identify various genomic loci and genes associated with the meat quality in pigs. However, the full genetic architecture of the trait still remains unclear in part because o...

    Authors: Daehong Kwon, Nayoung Park, Suyeon Wy, Daehwan Lee, Woncheoul Park, Han-Ha Chai, In-Cheol Cho, Jongin Lee, Kisang Kwon, Heesun Kim, Youngbeen Moon, Juyeon Kim and Jaebum Kim
    Citation: BMC Genomics 2024 25:299
    Content type: Research Published on:

  12. Mitochondrial genomes play important roles in studying genome evolution, phylogenetic analyses, and species identification. Amphipods (Class Malacostraca, Order Amphipoda) are one of the most ecologically dive...

    Authors: Joseph B. Benito, Megan L. Porter and Matthew L. Niemiller
    Citation: BMC Genomics 2024 25:298
    Content type: Research Published on:

  13. Black flounder (Paralichthys orbignyanus, Pleuronectiformes) is a commercially significant marine fish with promising aquaculture potential in Argentina. Despite extensive studies on Black flounder aquaculture, i...

    Authors: Fernando Villarreal, Germán F. Burguener, Ezequiel J. Sosa, Nicolas Stocchi, Gustavo M. Somoza, Adrián G. Turjanski, Andrés Blanco, Jordi Viñas and Alejandro S. Mechaly
    Citation: BMC Genomics 2024 25:297
    Content type: Research Published on:

  14. Body weight and size are important economic traits in chickens. While many growth-related quantitative trait loci (QTLs) and candidate genes have been identified, further research is needed to confirm and char...

    Authors: Jie Wang, Jie Liu, Qiuxia Lei, Zhihe Liu, Haixia Han, Shuer Zhang, Chao Qi, Wei Liu, Dapeng Li, Fuwei Li, Dingguo Cao and Yan Zhou
    Citation: BMC Genomics 2024 25:296
    Content type: Research Published on:

  15. Mammalian testis is a highly complex and heterogeneous tissue. This complexity, which mostly derives from spermatogenic cells, is reflected at the transcriptional level, with the largest number of tissue-speci...

    Authors: Carlos Romeo-Cardeillac, María Fernanda Trovero, Santiago Radío, Pablo Smircich, Rosana Rodríguez-Casuriaga, Adriana Geisinger and José Sotelo-Silveira
    Citation: BMC Genomics 2024 25:295
    Content type: Research Published on:

  16. Muscle growth post-birth relies on muscle fiber number and size. Myofibre number, metabolic and contractile capacities are established pre-birth during prenatal myogenesis. The aim of this study was to identif...

    Authors: Fatemeh Mohammadi Nejad, Mohammadreza Mohammadabadi, Zahra Roudbari, Abdolvahab Ebrahimpour Gorji and Tomasz Sadkowski
    Citation: BMC Genomics 2024 25:294
    Content type: Research Published on:

  17. Alternative splicing (AS) is a principal mode of genetic regulation and one of the most widely used mechanisms to generate structurally and functionally distinct mRNA and protein variants. Dysregulation of AS ...

    Authors: Zheng Zhang, Limei Dong, Hai Tao, Yusong Dong, Wei Xiang, Fenghua Tao and Yingchun Zhao
    Citation: BMC Genomics 2024 25:293
    Content type: Research Published on:

  18. Dystrophinopathies are the most common X-linked inherited muscle diseases, and the disease-causing gene is DMD. Exonic duplications are a common type of pathogenic variants in the DMD gene, however, 5’ end exonic...

    Authors: Jiandong Shen, Taoli Ding, Xueping Sun, Ji Yang, Yue Zhang, Jing Wang, Mengdi Ge, Heng Xu, Jiazi Xie, Fei Wang and Feiyang Diao
    Citation: BMC Genomics 2024 25:292
    Content type: Research Published on:

  19. Thymus mongolicus (family Lamiaceae) is a Thyme subshrub with strong aroma and remarkable environmental adaptability. Limited genomic information limits the use of this plant.

    Authors: Zhenhua Dang, Ying Xu, Xin Zhang, Wentao Mi, Yuan Chi, Yunyun Tian, Yaling Liu and Weibo Ren
    Citation: BMC Genomics 2024 25:291
    Content type: Research Published on:

  20. Antimicrobial resistance (AMR) of Neisseria gonorrhoeae is a threat to public health as strains have developed resistance to antimicrobials available for the treatment of gonorrhea. Whole genome sequencing (WGS) ...

    Authors: Kelvin Lutambo Sarenje, Marco van Zwetselaar, Happiness Kumburu, Tolbert Sonda, Blandina Mmbaga, Owen Ngalamika, Margaret C. Maimbolwa, Amon Siame, Sody Munsaka and Geoffrey Kwenda
    Citation: BMC Genomics 2024 25:290
    Content type: Research Published on:

  21. Rahnella perminowiae S11P1 and Variovorax sp. S12S4 are two plant growth-promoting rhizobacteria that were previously isolated from the rhizosphere of Crocus sativus L. (saffron), and have demonstrated interestin...

    Authors: Rahma ZOUAGUI, Houda ZOUAGUI, Jamal AURAG, Azeddine IBRAHIMI and Laila SBABOU
    Citation: BMC Genomics 2024 25:289
    Content type: Research Published on:

  22. Larch is an important component of northern forests and a major cultivated tree species in restoration of forest cover using improved seed material. In recent years, the continuous low seed production has seve...

    Authors: Junfei Hao, Daixi Xu, Chen Wang, Qing Cao, Qingrong Zhao, Miaomiao Xie, Hanguo Zhang and Lei Zhang
    Citation: BMC Genomics 2024 25:288
    Content type: Research Published on:

  23. Antimicrobial resistance (AMR) remains a significant global health threat particularly impacting low- and middle-income countries (LMICs). These regions often grapple with limited healthcare resources and acce...

    Authors: Mike Nsubuga, Ronald Galiwango, Daudi Jjingo and Gerald Mboowa
    Citation: BMC Genomics 2024 25:287
    Content type: Research Published on:

  24. Encystment is an important survival strategy extensively employed by microbial organisms to survive unfavorable conditions. Single-celled ciliated protists (ciliates) are popular model eukaryotes for studying ...

    Authors: Didi Jin, Chao Li, Xiao Chen, Yurui Wang, Khaled A. S. Al-Rasheid, Naomi A. Stover, Chen Shao and Tengteng Zhang
    Citation: BMC Genomics 2024 25:286
    Content type: Research Published on:

  26. Climate change is a threat to sustainable livestock production and livelihoods in the tropics. It has adverse impacts on feed and water availability, disease prevalence, production, environmental temperature, ...

    Authors: Fasil Getachew Kebede, Martijn F.L. Derks, Tadelle Dessie, Olivier Hanotte, Carolina Pita Barros, Richard P.M.A. Crooijmans, Hans Komen and John W.M. Bastiaansen
    Citation: BMC Genomics 2024 25:284
    Content type: Research Published on:

  27. MYB transcription factors play an extremely important regulatory role in plant responses to stress and anthocyanin synthesis. Cloning of potato StMYB-related genes can provide a theoretical basis for the genetic ...

    Authors: Bi-Cong Chen, Xiao-Jie Wu, Qiu-Ju Dong and Ji-Ping Xiao
    Citation: BMC Genomics 2024 25:283
    Content type: Research Published on:

  28. Blood transcriptomic analysis is widely used to provide a detailed picture of a physiological state with potential outcomes for applications in diagnostics and monitoring of the immune response to vaccines. Ho...

    Authors: Elody Orcel, Hayat Hage, May Taha, Noémie Boucher, Emilie Chautard, Virginie Courtois and Adrien Saliou
    Citation: BMC Genomics 2024 25:282
    Content type: Research Published on:

  29. Drought stress can significantly affect plant growth, development, and yield. Fewer comparative studies have been conducted between different species of pines, particularly involving Pinus yunnanensis var. pygmae...

    Authors: Feng Xiao, Yang Zhao, Xiurong Wang, Xueyan Jian and Yao Yang
    Citation: BMC Genomics 2024 25:281
    Content type: Research Published on:

  30. Atrial fibrillation (AF) is a prevalent arrhythmic condition resulting in increased stroke risk and is associated with high mortality. Electrolyte imbalance can increase the risk of AF, where the relationship ...

    Authors: Yang Wu, Xiang-Jun Kong, Ying-Ying Ji, Jun Fan, Cheng-Cheng Ji, Xu-Miao Chen, Yue-Dong Ma, An-Li Tang, Yun-Jiu Cheng and Su-Hua Wu
    Citation: BMC Genomics 2024 25:280
    Content type: Research Published on:

  31. The majority of bat species have developed remarkable echolocation ability, especially for the laryngeally echolocating bats along with high-frequency hearing. Adaptive evolution has been widely detected for t...

    Authors: Xintong Li, Hui Wang, Xue Wang, Mingyue Bao, Ruyi Sun, Wentao Dai, Keping Sun and Jiang Feng
    Citation: BMC Genomics 2024 25:279
    Content type: Research Published on:

  32. There is an ongoing process in which mitochondrial sequences are being integrated into the nuclear genome. The importance of these sequences has already been revealed in cancer biology, forensic, phylogenetic ...

    Authors: Bálint Biró, Zoltán Gál, Zsófia Fekete, Eszter Klecska and Orsolya Ivett Hoffmann
    Citation: BMC Genomics 2024 25:278
    Content type: Research Published on:

  33. Indian jointvetch (Aeschynomene indica) is a common and pernicious weed found in the upland direct-seeding rice fields in the lower reaches of the Yangtze River in China. However, there are few reports on the deg...

    Authors: Yuan Gao, TianYu Chen, Jiaqi Long, Guohui Shen and Zhihui Tian
    Citation: BMC Genomics 2024 25:277
    Content type: Research Published on:

  34. Plant diseases caused by pathogenic fungi are devastating. However, commonly used fungicides are harmful to the environment, and some are becoming ineffective due to fungal resistance. Therefore, eco-friendly ...

    Authors: Ee Li, Kaiquan Liu, Shuhan Yang, Ling Li, Kun Ran, Xiaoli Sun, Jie Qu, Li Zhao, Yuxiu Xin, Feng Zhu, Jingfang Ma, Feng Song and Zhenghua Li
    Citation: BMC Genomics 2024 25:276
    Content type: Research Published on:

  35. The spread of Popillia japonica in non-native areas (USA, Canada, the Azores islands, Italy and Switzerland) poses a significant threat to agriculture and horticulture, as well as to endemic floral biodiversity, ...

    Authors: Claudio Cucini, Sara Boschi, Rebecca Funari, Elena Cardaioli, Nicola Iannotti, Giovanni Marturano, Francesco Paoli, Mirella Bruttini, Antonio Carapelli, Francesco Frati and Francesco Nardi
    Citation: BMC Genomics 2024 25:275
    Content type: Research Published on:

  36. Tuber starch and steroidal glycoalkaloid (SGA)-related traits have been consistently prioritized in potato breeding, while allelic variation pattern of genes that underlie these traits is less explored.

    Authors: Hongbo Li, Matthijs Brouwer, Elena Del Pup, Natascha van Lieshout, Richard Finkers, Christian W. B. Bachem and Richard G. F. Visser
    Citation: BMC Genomics 2024 25:274
    Content type: Research Published on:

  37. There are two major genetic types of Epstein-Barr Virus (EBV): type 1 (EBV-1) and type 2 (EBV-2). EBV functions by manipulating gene expression in host B cells, using virus-encoded gene regulatory proteins inc...

    Authors: Kenyatta C. M. F. Viel, Sreeja Parameswaran, Omer A. Donmez, Carmy R. Forney, Matthew R. Hass, Cailing Yin, Sydney H. Jones, Hayley K. Prosser, Arame A. Diouf, Olivia E. Gittens, Lee E. Edsall, Xiaoting Chen, Hope Rowden, Katelyn A. Dunn, Rui Guo, Andrew VonHandorf…
    Citation: BMC Genomics 2024 25:273
    Content type: Research Published on:

  40. Mung bean (Vigna radiata (L.) Wilczek), is an important pulse crop in the global south. Early flowering and maturation are advantageous traits for adaptation to northern and southern latitudes. This study investi...

    Authors: Kevin O. Chiteri, Ashlyn Rairdin, Kulbir Sandhu, Sven Redsun, Andrew Farmer, Jamie A. O’Rourke, Steven B. Cannon and Arti Singh
    Citation: BMC Genomics 2024 25:270
    Content type: Research Published on:

  41. Polymorphisms of Plasmodium falciparum chloroquine resistance transporter (pfcrt), Plasmodium falciparum multi-drug resistance 1 (pfmdr1) and Plasmodium falciparum kelch 13-propeller (pfk13) genes are accepted as...

    Authors: Phunuch Muhamad, Papichaya Phompradit, Wanna Chaijaroenkul and Kesara Na-Bangchang
    Citation: BMC Genomics 2024 25:269
    Content type: Research Published on:

  42. The core regulation of the abscisic acid (ABA) signalling pathway comprises the multigenic families PYL, PP2C, and SnRK2. In this work, we conducted a genome-wide study of the components of these families in Cucu...

    Authors: Jessica Iglesias-Moya, Álvaro Benítez, María Segura, Sonsoles Alonso, Dolores Garrido, Cecilia Martínez and Manuel Jamilena
    Citation: BMC Genomics 2024 25:268
    Content type: Research Published on:

  43. In every omics experiment, genes or their products are identified for which even state of the art tools are unable to assign a function. In the biotechnology chassis organism Pseudomonas putida, these proteins of...

    Authors: Steven Tavis and Robert L. Hettich
    Citation: BMC Genomics 2024 25:267
    Content type: Research Published on:

  45. Over the last decades, it was subject of many studies to investigate the genomic connection of milk production and health traits in dairy cattle. Thereby, incorporating functional information in genomic analys...

    Authors: Helen Schneider, Ana-Marija Krizanac, Clemens Falker-Gieske, Johannes Heise, Jens Tetens, Georg Thaller and Jörn Bennewitz
    Citation: BMC Genomics 2024 25:265
    Content type: Research Published on:

  47. Escherichia coli, a ubiquitous inhabitant of the gut microbiota, has been recognized as an indicator of fecal contamination and a potential reservoir for antibiotic resistance genes. Its prevalence in drinking wa...

    Authors: Oluwaseyi Samuel Olanrewaju, Lesego G Molale-Tom, Rinaldo K Kritzinger and Cornelius Carlos Bezuidenhout
    Citation: BMC Genomics 2024 25:263
    Content type: Research Published on:

  48. Plague, as an ancient zoonotic disease caused by Yersinia pestis, has brought great disasters. The natural plague focus of Marmota himalayana in the Qinghai-Tibet Plateau is the largest, which has been constantly...

    Authors: Ying Ma, Pengbo Liu, Ziyan Li, Yujuan Yue, Yanmei Zhao, Jian He, Jiaxin Zhao, Xiuping Song, Jun Wang, Qiyong Liu and Liang Lu
    Citation: BMC Genomics 2024 25:262
    Content type: Research Published on:

  50. In this study, we conducted an assembly and analysis of the organelle genomes of Aconitum carmichaelii. Our investigation encompassed the examination of organelle genome structures, gene transfer events, and the ...

    Authors: Rongxiang Zhang, Niyan Xiang, Changjiang Qian, Shuwen Liu, Yuemei Zhao, Guiyu Zhang, Pei Wei, Jianfeng Li and Tao Yuan
    Citation: BMC Genomics 2024 25:260
    Content type: Research Published on:

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BMC Genomics

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