Table 1 Anchoring of Ae. tauschii contigs on the genetic map of Ae. tauschii chromosome 2D with Illumina GoldenGate oligonucleotide assays.
Locus | Map position (cM) | Positive clones anchored | Contig |
|---|---|---|---|
BE489611 | 28.2 | RI063B22, HI094B3, HB051N10 | ctg9144 |
BF201235 | 28.3 | HD143B20, RI053K20, RI127F20, HI043L21, HD013G23 | ctg4666 |
BE518440 | 46.2 | HB123G1, RI004M10, HI113P4, RI105L19* | ctg6274 |
BE500206 | 63.8 | HI143K4, HI003A22, HI012B19, HI090K7, HD123H5, RI056P19, BB048O9 | ctg7899 |
BE497494 | 85.9 | BB093B14, HB123K12, HB008P16, HB133H13 | ctg8357** |
BE497494 | 85.9 | HB004F21, HB123L18, HB123M5, HD008O15 | ctg5568** |
BE405367 | 87.3 | HD087H2, HD141H13, HD137I4, HB059H9, RI112C12, RI118E2, HD121I8, HI123C14, BB100F2* | ctg10452 |
BE499671 | 88.9 | HB012H8, HI129G1, HD057E7, HD121M12 | ctg5065 |
BE499671 | 88.9 | HB012I17 | ctg7763 |
BE499478 | 88.9 | HI090L10, RI035P6, BB079N19, BB110C10, HB043B9 | ctg1170 |
BE445242 | 89.0 | HD072M21, HB007A23, HI050N18, HB015E4, HB035C6, HB036O19, HI039G10, HB060O15, HD151B19 | ctg9317 |
BE498730 | 89.0 | HB030C17, HB033C8 | ctg1617 |
BF202681 | 89.0 | HD116C6, HB009B12, HB040H21, HI140N22, HI124O3 | ctg6734 |
BQ169707 | 92.3 | RI103N16 | ctg1280 |
BF478936 | 92.7 | HD039I3, RI012F23, HD107L14, HI077L6, RI070K18, RI024B7* | ctg8860 |
BE497590 | 96.9 | RI015E2, HI117D24, HI148P10 | ctg144 |
BE497590 | 96.9 | HI053D12, HI037I5, HI094B9, HI122O11, HI152F13 | ctg8859 |
BG313656 | 98.1 | HB034O15, HB062N11, RI112D8, HI029J12, HD032F21 | ctg982 |
BG263521 | 98.8 | HD132P10, HB021B10, HD033G4, HI148C2, BB067M15, BB081E2, BB107K11, RI043J14 * | ctg7791** |
BG263521 | 98.8 | BB081O16, RI032D19 | ctg2288** |
BF291674 | 102.4 | HD074O4, BB054A2, HB027O2, RI107N10, RI136G23, HI037F12 | ctg10410 |
BF483083 | 102.4 | BB038N07, HB023N15, HB081O4, HD080K19, HI078L18, HI146A6, RI084G17, BB123G5* | ctg2905 |
BE517627 | 103.1 | HD065I16, HD050E11, HD053J2, HD057A20, HB055D1, HB083C24, RI076J11 | ctg4985 |
BE442608 | 103.1 | BB092N18, BB070C1, HB006B8, HB086J7, HB096K20, HD133P21, HI137N13, RI019F6 | ctg4985 |
BE591248 | 103.3 | RI020P1, RI091B2, HD091O22, HD137A8, HB078N22, BB032J4, | ctg3732 |
BE404384 | 104.2 | HD062D2, BB047B24, HB110L22, HI080L19, RI061L5, RI064P6 | ctg6492 |
BE405045 | 104.3 | HD074J1, HD068K4, HI052G12, RI076M20, RI124J20 | ctg5942 |
BQ161196 | 104.3 | HB067J7 | ctg8076** |
BQ161196 | 104.3 | HB125P19, HB075P15, BB003G7 | ctg6731** |
BG606625 | 104.4 | BB061O1, BB061P1, HB040G1, HB082C18, HB084M10, HD026P1, HD112E21 HI152K3, RI018P5, RI131L21, RI146B11 | ctg3670 |
BE604861 | 104.4 | HB002K4, HD135K22, RI013H19, RI023K17, BB083K1* | ctg5648 |
BE490204 | 107.1 | BB011G22, HD119G21, HI105F9, HD006K24* | ctg4240 |
BG313179 | 109.8 | HD133K07 | ctg3100 |
BE499362 | 109.8 | HD074A1, HB001O3, HI143M21, HD034C5, RI051M5 | ctg11438 |
BE406509 | 110.7 | HI004N13, BB104N3, HD120D6 | ctg251 |
BE442788 | 111.7 | HD075A10, HD123P4, HI026J16, HI061H17, HI116C6, RI119E3 | ctg4801 |
BF145580 | 111.8 | HB003H1, BB025P18, HD005P3, HD049H11, HI116D20, HI130J21, RI136C15, | ctg4928 |
BE403597 | 113.5 | RI083G1, RI113K18, RI143I24, HI019M23 | ctg977 |
BG274019 | 117.1 | HB006A23, HD052A8, HD063B18, HD066I10* | ctg1700 |
BE444264 | 118.8 | HB012D18, BB092N14, HB032L12, HD051K23, HI090M22, RI107M7 | ctg4732 |
BE406908 | 120.9 | BB056F7, HB061D24, HB081H12, HB131E21, HD020E20, HI031B4, RI126O19 | ctg3828 |
BF201830 | 121.3 | HB075L11, RI069N16, HI024C6, HI027G18, RI069N16, BB136N11* | ctg5622 |
BQ169383 | 121.3 | HD114P13, BB065I18, BB071O3, RI046H10, HI002O17, HI041M18 | ctg5622 |
BF473744 | 135.1 | BB019A18, BB097O11, HB119C7, HB123C17, RI035O12, RI062D7 | ctg7871 |
BE517946 | 157.8 | HI142E11, HD063P2, HI124C3, RI012J19, BB194H17* | ctg7891 |
BF483221 | 170.7 | HB007M06, HD026P3, HI132A22, HD056A9 | ctg1415 |
BE426620 | 179.2 | HB104E22, HB117D08, RI101P15, RI112H4, HI065F13 | ctg11040 |
BE490384 | 186.9 | BB067N14, HB092N14, HD108D13, BB018I20* | ctg3479 |