Table 1 Annotation of the mitochondrial genome of Crassostrea hongkongensis.

Gene	Position	Size		Codon		Intergenic Nucleotides*
		Nucleotide	Amino acids	Start	Stop
*cox1*	1–1617	1617	538	ATA	TAA	1
*rrnL* 3'half	1761–2472	712				143
*cox3*	2575–3438	864	287	ATA	TAA	231
*trnI*	3439–3505	67				0
*trnT*	3506–3573	68				0
*trnE*	3595–3662	68				21
*cob*	3670–4875	1206	401	ATA	TAA	130
*trnD*	4984–5052	69				108
*cox2*	5054–5755	702	233	ATG	TAG	1
*trnM* ₁ ^(ATG)	5777–5842	66				21
*trnS* ₁ ^(AGN)	5846–5915	70				3
*trnL* ₂ ^(UUR)	5931–5997	67				15
*trnM* ₂ ^(ATG)	6065–6129	65				67
*trnS* ₂ ^(UCN)	6137–6204	68				7
*trnP*	6383–6451	69				178
*rrnS* ₁	6452–7525	1074				0
*trnK* ₁	7526–7594	69				0
*trnC*	7624–7691	68				29
*trnQ* ₁ ^(CAA)	7709–7777	69				17
*rrnL* 5'half	7780–8384	605				1
*trnN*	8443–8508	66				58
*rrnS* ₂	8509–9698	1190				0
*trnY*	9699–9764	66				0
*atp6*	9770–10453	684	227	ATG	TAG	5
*trnG*	10966–11035	70				512
*trnV*	11644–11716	73				608
*nad2*	11759–12757	999	332	ATG	TAG	42
*trnR*	12792–12858	67				34
*trnH*	12919–12983	65				60
*nad4*	12986–14335	1350	449	ATA	TAG	2
*trnK* ₂ ^(AAA)	14343–14417	75				7
*nad5*	14419–16089	1671	556	ATG	TAA	1
*nad6*	16101–16576	476	158	ATT	TA-	11
*trnQ* ₂ ^(CAA)	16610–16678	69				33
*nad3*	16684–17034	351	116	ATG	TAG	5
*trnL* ₁ ^(CUN)	17070–17135	66				35
*trnF*	17171–17238	68				35
*trnA*	17259–17325	67				20
*nad1*	17331–18266	936	311	ATG	TAA	5
*nad4L*	18270–18549	280	93	ATG	T-	3
*trnW*	18550–18618	69	22			0

"-" indicates termination codons completed via polyadenylation.
Underlined genes correspond to a segment missing in Yu et al.' sequence due to a sequencing artifact.

ISSN: 1471-2164