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Table 2 The list of top ranked motifs based on the weight scheme by the kernel CCA

From: Identification of cell cycle-related regulatory motifs using a kernel canonical correlation analysis

Motif

Weight

Function

Reference

SWI5

0.89026

Transcription activation in G1 phase

[19, 20]

SFF'

0.45399

FKH1 binding site that regulate the cell cycle

[21]

MCB

0.29633

MBF binding site that activates in late G1 phase

[19, 22]

LYS14

0.21796

Lysine biosysthesis pathway

 

ALPHA2

0.16532

Encoding a homeobox-domain

[23, 24]

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BMC Genomics

ISSN: 1471-2164

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