From: Transcriptome sequencing for SNP discovery across Cucumis melo
Genotype/collection code | Origin | Collection | Flower and fruit traits | % Mapped reads | Number of processed reads a1 |
---|---|---|---|---|---|
Subsp. agrestis | |||||
Pool 1: African agrestis | |||||
Tibish/CO199 | Sudan | MELRIP | Mostly monoecious. Mostly small inedible fruits (<5 cm). Round to oval. Light green-white flesh. Non climacteric. No aroma. No sugar. | 43.7 | 30,620,160 |
Fadasi/CO133 | Sudan | MELRIP | Â | Â | |
HSD/CO145 | Sudan | MELRIP | Â | Â | |
Tayer/CO195 | Cameroon | MELRIP | Â | Â | |
Agrestis/CUM 287 | Nigeria | IPK | Â | Â | Â |
Pool 2: Asian agrestis- acidulus | |||||
Agrestis Wild chibbar/CO204 | India | COMAV | Monoecious. Small to medium sized fruits. Oval, elliptic to elongated. Mostly non climacteric. White-light orange flesh. No aroma. No sugar. Low pH. | 56.7 | 15,779,803 |
Acidulus SLK/CO187 | Sri Lanka | MELRIP | Â | Â | |
Agrestis Meloncito/CO153 | India | COMAV | Â | Â | |
Acidulus TGR 1551/PI 482420 | Zimbabwe | NPGS | Â | Â | |
Voatango/CO202 | Madagascar | MELRIP | Â | Â | Â |
Arya/CO115 | India | COMAV | Â | Â | Â |
Pool 3: Far East conomon | |||||
Pat81/CO32 | Korea | COMAV | Andromonoecious-hermaphroditic. Medium sized fruits. Flat, round to elongated. White-green-light orange flesh. Non climacteric-medium climacteric. Medium aroma. Medium sugar. | 56.1 | 17,962,640 |
Freemans´s Cucumber/CO136 | Japan | COMAV |  |  | |
Songwhan Charmi/PI 161375 | Korea | NPGS | Â | Â | |
Nabunkin/CO153 | China | MELRIP | Â | Â | |
Paul/CO169 | Poland | MELRIP | Â | Â | |
Intermediate types between subspecies | |||||
Pool 4: Middle East and Indian momordica, dudaim and flexuosus | |||||
Momordica/PI124112 | India | NPGS | Andromonoecious-monoecious. Round, flat, oval to very elongated fruits. White-light orange flesh. Climacteric. No to intermediate sugar. Medium to strong aroma. Low pH. | 55.3 | 23,320,668 |
Momordica/PI124111 | India | NPGS | Â | Â | |
Momordica/CUM 438 | India | IPK | Â | Â | |
Snakemelon/CO188 | Saudi Arabia | MELRIP | Â | Â | |
Flexuosus/CUM 353 | Iraq | IPK | Â | Â | Â |
Flexuosus/CUM 225 | India | IPK | Â | Â | Â |
Dudaim Queen´s pocket melon/CO180 | Afghanistan | COMAV |  |  |  |
Subsp. melo | |||||
Pool 5: Group cantalupensis | |||||
Noy Israel/CO162 | Israel | COMAV | Andromonoecious-monoecious- gynoecious. Medium to large size fruits. Flat to oval. Round or ribbed. Green- orange flesh. Climacteric. Sweet. Aromatic. | 48.1 | 23,237,004 |
Noir des carmes/CO161 | France | COMAV | Â | Â | |
Prescott Fond Blanc/CO179 | France | COMAV | Â | Â | |
TopMARK/NSL30032 | USA | NPGS | Â | Â | |
Nantais Oblong/CO159 | France | MELRIP | Â | Â | Â |
Gynadou/CO141 | France | MELRIP | Â | Â | Â |
Cantalupd´alger/CO121 | France | MELRIP |  |  |  |
PMR45/CO178 | USA | MELRIP | Â | Â | Â |
5 Charentais breeding lines | Spain | S.Fitó S.A |  |  |  |
Pool 6: Group melo Eastern Europe, Central Asia, inodorus, chandalack, ameri | |||||
Honeydew/CO143 | USA | COMAV | Monoecious-andromonoecious. Medium-size fruits. Oval, flat to elongated. White-green-light orange flesh. Climacteric. Sweet, variable sugar content. Medium to low aroma. | 34.3 | 8,367,385 |
Kirkagac/CO150 | Turkey | COMAV | Â | Â | |
Muchanesvi/CO156 | Georgia | MELRIP | Â | Â | |
Baskavas/CO118 | Greece | MELRIP | Â | Â | |
Korca/Cum168 | Rusia | IPK | Â | Â | |
Kiziluruk/CO96 | Uzbequistan | COMAV | Â | Â | Â |
Hami melon/CO142 | China | COMAV | Â | Â | Â |
Winter type/PI169329 | Turkey | NPGS | Â | Â | Â |
Maazoon/CO85 | Egypt | COMAV | Â | Â | Â |
Blanco/CO67 | Spain | COMAV | Â | Â | Â |
Carosello/CO122 | Italy | COMAV | Â | Â | Â |
Pool 7: inodorus Spanish landraces | |||||
Cañadulce/CO48 | Spain | COMAV | Andromonoecious. Large-sized fruits. Round to elliptic. White-Green flesh. Non climacteric. Sweet. Low aroma. | 50.6 | 17,485,023 |
Madura amarilla/CO58 | Spain | COMAV | Â | Â | |
Erizo/CO75 | Spain | COMAV | Â | Â | |
Amarillo oro/CO79 | Spain | COMAV | Â | Â | |
Escrito oloroso/CO50 | Spain | COMAV | Â | Â | |
Tendral/CO59 | Spain | COMAV | Â | Â | Â |
Verde pinto/CO73 | Spain | COMAV | Â | Â | Â |
Coca/CO49 | Spain | COMAV | Â | Â | Â |
Mochuelo/CO48 | Spain | COMAV | Â | Â | Â |
Largo de Villaconejos/CO69 | Spain | COMAV | Â | Â | Â |
5 Amarillo breeding lines | Spain | S.Fitó S.A |  |  |  |
Pool 8: inodorus group market class Piel de sapo | |||||
T111 | Spain | S.Fitó S.A | Andromonoecious. Large-sized fruits. Round to elliptic. White-green flesh. Non climacteric. Sweet. No aroma. | 37.2 | 13,809,773 |
5 Piel de Sapo breeding lines | Spain | S.Fitó S.A |  |  |