From: Fate of the human Y chromosome linked genes and loci in prostate cancer cell lines DU145 and LNCaP
Serial No. | STS Identifier | Location | Multi-Copy | STS Status in DU145 | STS status in LNCaP |
---|---|---|---|---|---|
1 | sY14 | SRY exon 1 | + | + | |
2 | sY1240 | PCDH11Y intron 3 | + | + | |
3 | sY276 | AMELY exon 4/intron 4 | + | + | |
4 | sY1238 | TBL1Y exon 11 | + | + | |
5 | sY637 | PRKY 5’ upstream of gene | + | + | |
6 | sY1319 | PRKY 3’ UTR | + | + | |
7 | sY1250 | Proximal boundary of TSPY array | + | + | |
8 | sY78 | Alpha satellite (DYZ3) sequences in centromeric region | * | + | + |
9 | sY1251 | Boundary between centromere and Yq | + | + | |
10 | sY1317 | USP9Y exon 3 | + | + | |
11 | sY1316 | USP9Y exon 26 | + | + | |
12 | sY1234 | DDX3Y (DBY) exon 9 | + | + | |
13 | sY1231 | UTY exon 8 | + | + | |
14 | sY1235 | XKRY exon 1 | * | + | + |
15 | sY1260 | CDY2 exon 1 | * | + | + |
16 | sY1237 | HSFY exon 2 | * | + | + |
17 | sY121 | Immediately distal to palindrome P4 | + | + | |
18 | sY1322 | Between CYorf15A & CYorf15B | + | + | |
19 | sY280 | JARID1D (SMCY) exon 9/intron 9 | + | + | |
20 | sY1233 | EIF1AY exon 1 | + | + | |
21 | sY1682 | RPS4Y2 exon 1 | + | + | |
22 | sY627 | RBMY1 exon 12 | * | + | + |
23 | sY1258 | Boundary between unique sequence u1 & blue amplicon b1 in AZFc | + | + | |
24 | sY1161 | PRY intron 2 | * | + | + |
25 | sY1197 | Internal boundary of Palindrome P3 | + | + | |
26 | sY1191 | Unique sequence u3 in AZFc | + | + | |
27 | sY1035 | BPY2 intron 5 | * | + | + |
28 | sY1318 | DAZ exon 11 | * | + | + |
29 | sY254 | DAZ exon 3 | * | + | + |
30 | sY1291 | Red/gray boundary in AZFc | + | + | |
31 | sY1125 | Blue/gray boundary in AZFc | * | + | + |
32 | sY1054 | Blue/yellow boundary in AZFc | * | + | + |
33 | sY1190 | Yellow amplicon in AZFc | * | + | + |
34 | sY1263 | CDY1 exon 1/intron 1 | * | + | + |
35 | sY1206 | Yellow/green boundaries in AZFc | * | + | + |
36 | sY1201 | Distal boundary of gray amplicon in AZFc | + | + | |
37 | sY1256 | TSPY intron 5 | * | + | + |
38 | sY1247 | Boundary between PAR1 and MSY | + | + | |
39 | sY1230 | TMSB4Y exon 1/intron 1 | + | + | |
40 | sY1166 | In MSY between distal Yq heterochromatin & PAR2 | + | + | |
41 | sY274 | RPS4Y1 intron 4 | + | + | |
42 | sY1220 | VCY exon 2 | * | + | + |
43 | sY90 | KALP intron 1 | + | + | |
44 | sY210 | STSP intron 5 | + | + | |
45 | sY1254 | TGIF2LY exon 1 | + | + | |
46 | sY1239 | NLGN4Y exon 1 | + | + | |
47 | sY1273 | Near boundary between MSY & PAR2 | + | + | |
48 | sY238 | ZFY intron 2 | + | + | |
49 | sY1246 | Proximal portion of distal Yq heterochromatin | + | + | |
50 | sY142 | Proximal to AZFc | + | + | |
51 | sY160 | Satellite-3 (DYZ1) sequences in distal Yq heterochromatin | * | + | + |