BMC Genomics

Announcing In Review - now available in BMC Genomics

BMC Genomics in partnership with Research Square, is launching In Review. This new option provides authors with on-demand information on the status of their manuscript, enables them to share their work with funders and their research community, and allows their colleagues to comment and collaborate - all whilst their manuscript is under review.

Featured articles

Dr. Jan Bielecki

Decoding the Tripedalia transcriptome

Box jellyfish transcriptome assembly leads to the identification of a set of novel genes involved in peptidergic neurotransmission, and highlights the evolution of important tissues and organs, such as the nervous system and eyes.

The Authors

Microglial activation - a matter of modules

A new framework for classifying microglial states using gene expression modules provides the foundation for their characterization in health and disease.

Content type: Research article
| 23 April 2019

Comprehensive characterization of T-DNA integration induced chromosomal rearrangement in a birch T-DNA mutant

Authors: Huixin Gang, Guifeng Liu, Manman Zhang, Yuming Zhao, Jing Jiang and Su Chen
Content type: Research article
| 23 April 2019

Tissue specific human fibroblast differential expression based on RNAsequencing analysis

Authors: Alexander G. Foote, Ziyue Wang, Christina Kendziorski and Susan L. Thibeault
Content type: Research article
| 23 April 2019

LightCpG: a multi-view CpG sites detection on single-cell whole genome sequence data

Authors: Limin Jiang, Chongqing Wang, Jijun Tang and Fei Guo
Content type: Research article
| 23 April 2019

Aging in the Drosophila ovary: contrasting changes in the expression of the piRNA machinery and mitochondria but no global release of transposable elements

Authors: Alexandra A. Erwin and Justin P. Blumenstiel
Content type: Research article
| 23 April 2019

Identification of genomic regions associated with multi-silique trait in Brassica napus

Authors: Liang Chai, Jinfang Zhang, Kun Lu, Haojie Li, Lintao Wu, Hongshen Wan, Benchuan Zheng, Cheng Cui, Jun Jiang and Liangcai Jiang

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Content type: Research article
| 24 July 2012

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

Authors: Michael A Quail, Miriam Smith, Paul Coupland, Thomas D Otto, Simon R Harris, Thomas R Connor, Anna Bertoni, Harold P Swerdlow and Yong Gu
Content type: Research article
| 12 March 2007

Gene expression profiling of human mesenchymal stem cells derived from bone marrow during expansion and osteoblast differentiation

Authors: Birgit Kulterer, Gerald Friedl, Anita Jandrositz, Fatima Sanchez-Cabo, Andreas Prokesch, Christine Paar, Marcel Scheideler, Reinhard Windhager, Karl-Heinz Preisegger and Zlatko Trajanoski
Content type: Research article
| 17 April 2015

Temperature during early development has long-term effects on microRNA expression in Atlantic cod

Authors: Teshome Tilahun Bizuayehu, Steinar D Johansen, Velmurugu Puvanendran, Hilde Toften and Igor Babiak
Content type: Research article
| 3 November 2014

Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress

Authors: Vikas Belamkar, Nathan T Weeks, Arvind K Bharti, Andrew D Farmer, Michelle A Graham and Steven B Cannon
Content type: Research article
| 27 April 2014

De novo genome assembly of the soil-borne fungus and tomato pathogen Pyrenochaeta lycopersici

Authors: Maria Aragona, Andrea Minio, Alberto Ferrarini, Maria Teresa Valente, Paolo Bagnaresi, Luigi Orrù, Paola Tononi, Gianpiero Zamperin, Alessandro Infantino, Giampiero Valè, Luigi Cattivelli and Massimo Delledonne

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Aims and scope

BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics.

Editor

Matteo Pasini, BioMed Central, UK

Manuscript Editor

Anne Menard, BioMedCentral, UK

Assistant Editors

Alexandria Latto, BioMed Central, UK
Bethan Wicker, BioMed Central, UK

Section Editors

Shane C Burgess, University of Arizona
Leonid Bystrkh, University of Groningen
Alexei Fedorov, University of Toledo
Scott E Hemby, Wake Forest University
David Lightfoot, Southern Illinois University at Carbondale
Leonard Schalkwyk, King's College London
Jacqueline Smith, The Roslin Institute
Theo Smits, Zürich University for Applied Sciences
Stefan Wiemann, German Cancer Research Center

Jacqueline Smith, Section Editor

Dr. Jacqueline Smith is a Career Track Fellow at The Roslin Institute in Edinburgh. She joined the Editorial Board of BMC Genomics in 2015.

Resources for authors

Standards of reporting

BMC Genomics advocates complete and transparent reporting of research. The BMC minimum standards of reporting checklist is intended as a tool for authors to transparently describe their research and ensure reproducibility. We encourage our authors to adhere to these standards when preparing their manuscript.

Research Data Support for authors

Research Data Support is an optional Springer Nature service available to researchers who have datasets they want to make easier to cite, share and find. Learn more about this service and the many benefits of making your data publicly available.

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09 April 2019

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BMC Genomics

Announcing In Review - now available in BMC Genomics

Featured articles

Decoding the Tripedalia transcriptome

Microglial activation - a matter of modules

Articles

Comprehensive characterization of T-DNA integration induced chromosomal rearrangement in a birch T-DNA mutant

Tissue specific human fibroblast differential expression based on RNAsequencing analysis

LightCpG: a multi-view CpG sites detection on single-cell whole genome sequence data

Aging in the Drosophila ovary: contrasting changes in the expression of the piRNA machinery and mitochondria but no global release of transposable elements

Identification of genomic regions associated with multi-silique trait in Brassica napus

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

Gene expression profiling of human mesenchymal stem cells derived from bone marrow during expansion and osteoblast differentiation

Temperature during early development has long-term effects on microRNA expression in Atlantic cod

Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress

De novo genome assembly of the soil-borne fungus and tomato pathogen Pyrenochaeta lycopersici

Aims and scope

Editor

Manuscript Editor

Assistant Editors

Section Editors

Jacqueline Smith, Section Editor

Resources for authors

Standards of reporting

Research Data Support for authors

BMC Series blog

The importance of negative results for family medicine

BMC Geriatrics – Highlights of 2018

Should I, or should I not? The ‘tricky business’ about healthcare decision making

Latest Tweets

2017 Journal Metrics

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Portable peer review

BMC Genomics

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