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  2. The evolution of parasites is often directly affected by the host's environment. Studies on the evolution of the same parasites in different hosts are of great interest and are highly relevant to our understan...

    Authors: Lei Han, Tianming Lan, Yaxian Lu, Mengchao Zhou, Haimeng Li, Haorong Lu, Qing Wang, Xiuyun Li, Shan Du, Chunyu Guan, Yong Zhang, Sunil Kumar Sahu, Puyi Qian, Shaofang Zhang, Hongcheng Zhou, Wei Guo…
    Citation: BMC Genomics 2022 23:489
    Content type: Research Published on:

  3. Quaternary ammonium compound (QAC) efflux genes increase the minimum inhibitory concentration of Listeria monocytogenes (Lm) to benzalkonium chloride sanitizer, but the contribution of these genes to persistence ...

    Authors: Devin Daeschel, James B. Pettengill, Yu Wang, Yi Chen, Marc Allard and Abigail B. Snyder
    Citation: BMC Genomics 2022 23:488
    Content type: Research Published on:

  5. Noncoding RNAs (ncRNAs), including microRNAs (miRNAs) and long noncoding RNAs (lncRNAs), are pivotal regulators involved in the pathogenic mechanism of multiple coronaviruses. Porcine deltacoronavirus (PDCoV) ...

    Authors: Shan Jiang, Jianfei Chen, Xiuli Li, Weike Ren, Fengxiang Li, Ting Wang, Cheng Li, Zhimin Dong, Xiangxue Tian, Li Zhang, Lili Wang, Chao lu, Jingjing Chi, Li Feng and Minghua Yan
    Citation: BMC Genomics 2022 23:486
    Content type: Research Published on:

  6. Our current view of the evolutionary history, coding and adaptive capacities of Apicomplexa, protozoan parasites of a wide range of metazoan, is currently strongly biased toward species infecting humans, as da...

    Authors: Julie Boisard, Evelyne Duvernois-Berthet, Linda Duval, Joseph Schrével, Laure Guillou, Amandine Labat, Sophie Le Panse, Gérard Prensier, Loïc Ponger and Isabelle Florent
    Citation: BMC Genomics 2022 23:485
    Content type: Research Published on:

  7. Apple replant disease is a soilborne disease caused by Fusarium proliferatum f. sp. malus domestica strain MR5 (abbreviated hereafter as Fpmd MR5) in China. This pathogen causes root tissue rot and wilting leaves...

    Authors: Yanan Duan, Shurui Ma, Xuesen Chen, Xiang Shen, Chengmiao Yin and Zhiquan Mao
    Citation: BMC Genomics 2022 23:484
    Content type: Research Published on:

  8. Zinc finger protein 143(ZNF143), a member of the Krüppel C2H2-type zinc finger protein family, is strongly associated with cell cycle regulation and cancer development. A recent study suggested that ZNF143 pla...

    Authors: Bingyu Ye, Wenlong Shen, Chunyan Zhang, Mengli Yu, Xinru Ding, Man Yin, Yahao Wang, Xinjie Guo, Ge Bai, Kailin Lin, Shu Shi, Ping Li, Yan Zhang, Guoying Yu and Zhihu Zhao
    Citation: BMC Genomics 2022 23:483
    Content type: Research Published on:

  9. Calliptamus italicus is a dominant species in the desert and semi-desert grassland. It is widely distributed throughout many regions such as Asia, Europe, North Africa and the Mediterranean, and has enormous dest...

    Authors: Qian Liu, Di Luo, Mengjia Wang, Xingmin Song, Xiaofang Ye, Roman Jashenko and Rong Ji
    Citation: BMC Genomics 2022 23:482
    Content type: Research Published on:

  10. Okra (Abelmoschus esculentus L. Moench) is an economically important crop and is known for its slimy juice, which has significant scientific research value. The A. esculentus chloroplast genome has been reported;...

    Authors: Jihan Li, Jingling Li, Yubo Ma, Lu Kou, Juanjuan Wei and Weixing Wang
    Citation: BMC Genomics 2022 23:481
    Content type: Research Published on:

  11. Lectin receptor-like kinases (Lec-RLKs), a subfamily of RLKs, have been demonstrated to play an important role in signal transduction from cell wall to the plasma membrane during biotic stresses. Lec-RLKs incl...

    Authors: Subhankar Biswas, Raju Mondal, Akanksha Srivastava, Maitri Trivedi, Sunil Kumar Singh and Yogesh Mishra
    Citation: BMC Genomics 2022 23:480
    Content type: Research Published on:

  12. SerpinB2 is highly expressed in immune and tumor cells and is involved in multiple biological functions, including cell survival and remodeling for disease progression. This study prepared SerpinB2-deficient m...

    Authors: Yin Ji Piao, Hoe Suk Kim, Wonshik Han and Woo Kyung Moon
    Citation: BMC Genomics 2022 23:479
    Content type: Research Published on:

  14. Calling germline SNP variants from bisulfite-converted sequencing data poses a challenge for conventional software, which have no inherent capability to dissociate true polymorphisms from artificial mutations ...

    Authors: Adam Nunn, Christian Otto, Mario Fasold, Peter F Stadler and David Langenberger
    Citation: BMC Genomics 2022 23:477
    Content type: Software Published on:

  16. Genome-scale metabolic network models (GEMs) provide an efficient platform for the comprehensive analysis the physical and biochemical functions of organisms due to their systematic perspective on the study of...

    Authors: Jingjing Li, Yifei Gou, Jiarui Yang, Lingxuan Zhao, Bin Wang, Tong Hao and Jinsheng Sun
    Citation: BMC Genomics 2022 23:475
    Content type: Research Published on:

  18. Tuberous root formation and development is a complex process in sweet potato, which is regulated by multiple genes and environmental factors. However, the regulatory mechanism of tuberous root development is u...

    Authors: Zhaoqin Cai, Zhipeng Cai, Jingli Huang, Aiqin Wang, Aaron Ntambiyukuri, Bimei Chen, Ganghui Zheng, Huifeng Li, Yongmei Huang, Jie Zhan, Dong Xiao and Longfei He
    Citation: BMC Genomics 2022 23:473
    Content type: Research Published on:

  19. Both the protein domains and transcript structures influence protein functional variation. The genomic location of both protein domains and transcript structural features can be described using the genomic coo...

    Authors: Hongwei Wang, Xiaotian Zhang, Shuangcheng Ding, Yujie Huang, Shengyong Wang, Huili Chen, Yuhang Chen and Yuting Li
    Citation: BMC Genomics 2022 23:472
    Content type: Software Published on:

  20. Emerging pathogenic bacteria are an increasing threat to public health. Two recently described species of the genus Aliarcobacter, A. faecis and A. lanthieri, isolated from human or livestock feces, are closely r...

    Authors: Jiacheng Chuan, Anatoly Belov, Michel Cloutier, Xiang Li, Izhar U. H. Khan and Wen Chen
    Citation: BMC Genomics 2022 23:471
    Content type: Research Published on:

  21. The selection of tissue culture–derived somaclonal variants of Giant Cavendish banana (Musa spp., Cavendish sub-group AAA) by the Taiwan Banana Research Institute (TBRI) has resulted in several cultivars resistan...

    Authors: Bo-Han Hou, Yi-Heng Tsai, Ming-Hau Chiang, Shu-Ming Tsao, Shih-Hung Huang, Chih-Ping Chao and Ho-Ming Chen
    Citation: BMC Genomics 2022 23:470
    Content type: Research Published on:

  22. Streptococcus parasuis (S. parasuis) is a close relative of Streptococcus suis (S. suis), composed of former members of S. suis serotypes 20, 22 and 26. S. parasuis could infect pigs and cows, and recently, human...

    Authors: Genglin Guo, Zhuohao Wang, Quan Li, Yanfei Yu, Yubao Li, Zhongming Tan and Wei Zhang
    Citation: BMC Genomics 2022 23:469
    Content type: Research Published on:

  24. T cell acute lymphoblastic leukemia (T-ALL) defines a group of hematological malignancies with heterogeneous aggressiveness and highly variable outcome, making therapeutic decisions a challenging task. We trie...

    Authors: Li-Jun Peng, Yue-Bo Zhou, Mei Geng, Ekaterina Bourova-Flin, Florent Chuffart, Wei-Na Zhang, Tao Wang, Meng-Qing Gao, Meng-Ping Xi, Zhong-Yi Cheng, Jiao-Jiao Zhang, Yuan-Fang Liu, Bing Chen, Saadi Khochbin, Jin Wang, Sophie Rousseaux…
    Citation: BMC Genomics 2022 23:467
    Content type: Research Published on:

  25. Opisthopappus is a major wild source of Asteraceae with resistance to cold and drought. Two species of this genus (Opisthopappus taihangensis and O. longilobus) have been employed as model systems to address the ...

    Authors: Ning Chen, Hao Zhang, En Zang, Zhi-Xia Liu, Ya-Fei Lan, Wei-Li Hao, Shan He, Xing Fan, Gen-Lou Sun and Yi-Ling Wang
    Citation: BMC Genomics 2022 23:466
    Content type: Research Published on:

  26. Type 2 diabetes mellitus (T2DM) has been associated with treatment failure, and the development of drug resistance in tuberculosis (TB). Also, whole-genome sequencing has provided a better understanding and al...

    Authors: Gustavo Adolfo Bermudez-Hernández, Damián Eduardo Pérez-Martínez, Carlos Francisco Madrazo-Moya, Irving Cancino-Muñoz, Iñaki Comas and Roberto Zenteno-Cuevas
    Citation: BMC Genomics 2022 23:465
    Content type: Research Published on:

  28. Ticks represent a major health issue for humans and domesticated animals. Exploring the expression landscape of the tick’s central nervous system (CNS), known as the synganglion, would be an important step in ...

    Authors: Claude Rispe, Caroline Hervet, Nathalie de la Cotte, Romain Daveu, Karine Labadie, Benjamin Noel, Jean-Marc Aury, Steeve Thany, Emiliane Taillebois, Alison Cartereau, Anaïs Le Mauff, Claude L. Charvet, Clément Auger, Elise Courtot, Cédric Neveu and Olivier Plantard
    Citation: BMC Genomics 2022 23:463
    Content type: Research Published on:

  29. Allorhizobium vitis (formerly named Agrobacterium vitis or Agrobacterium biovar 3) is the primary causative agent of crown gall disease of grapevine worldwide. We obtained and analyzed whole-genome sequences of d...

    Authors: Nemanja Kuzmanović, Enrico Biondi, Jörg Overmann, Joanna Puławska, Susanne Verbarg, Kornelia Smalla and Florent Lassalle
    Citation: BMC Genomics 2022 23:462
    Content type: Research Published on:

  30. Insect olfactory proteins can transmit chemical signals in the environment that serve as the basis for foraging, mate searching, predator avoidance and oviposition selection. Semanotus bifasciatus is an important...

    Authors: Han Li, Enhua Hao, Yini Li, Huan Yang, Piao Sun, Pengfei Lu and Haili Qiao
    Citation: BMC Genomics 2022 23:461
    Content type: Research Published on:

  31. Crossbreeding is an important way to improve production beef cattle performance. Pinan cattle is a new hybrid cattle obtained from crossing Piedmontese bulls with Nanyang cows. After more than 30 years of cros...

    Authors: Shunjin Zhang, Zhi Yao, Xinmiao Li, Zijing Zhang, Xian Liu, Peng Yang, Ningbo Chen, Xiaoting Xia, Shijie Lyu, Qiaoting Shi, Eryao Wang, Baorui Ru, Yu Jiang, Chuzhao Lei, Hong Chen and Yongzhen Huang
    Citation: BMC Genomics 2022 23:460
    Content type: Research Published on:

  33. Mucopolysaccharidosis IVA (Morquio syndrome A, MPS IVA) is an autosomal recessive lysosomal storage disorder caused due to biallelic variants in the N-acetylgalactoseamine-6-sulfate sulfatase (GALNS) gene. The mu...

    Authors: Harsh Sheth, Premal Naik, Maulin Shah, Riddhi Bhavsar, Aadhira Nair, Frenny Sheth and Jayesh Sheth
    Citation: BMC Genomics 2022 23:458
    Content type: Research Published on:

  34. Hu sheep and Tibetan sheep in China are characterized by fat tails and thin tails, respectively. Several transcriptomes have been conducted in different sheep breeds to identify the differentially expressed ge...

    Authors: Meilin Jin, Xiaojuan Fei, Taotao Li, Zengkui Lu, Mingxing Chu, Ran Di, Xiaoyun He, Xiangyu Wang and Caihong Wei
    Citation: BMC Genomics 2022 23:457
    Content type: Research Published on:

  35. This study examined the origin of present-day Lebanese using high-resolution HLA class I and class II allele and haplotype distributions. The study subjects comprised 152 unrelated individuals, and their HLA c...

    Authors: Wassim Y. Almawi, Rita Nemr, Ramzi R. Finan, F. Lisa Saldhana and Abdelhafidh Hajjej
    Citation: BMC Genomics 2022 23:456
    Content type: Research article Published on:

  36. Congenital cytomegalovirus immunopathogenesis is largely unknown and multifactorial due to the complex interactions between viral, maternal, placental, and child factors. Polymorphisms in the HLA-E binding UL4015...

    Authors: David Tarragó, Irene González and Maria Francisca González-Escribano
    Citation: BMC Genomics 2022 23:455
    Content type: Research Published on:

  37. Disease emergence and production loss caused by cattle tick infestations have focused attention on genetic selection strategies to breed beef cattle with increased tick resistance. However, the mechanisms behi...

    Authors: Emily F. Mantilla Valdivieso, Elizabeth M. Ross, Ali Raza, Muhammad Noman Naseem, Muhammad Kamran, Ben J. Hayes, Nicholas N. Jonsson, Peter James and Ala E. Tabor
    Citation: BMC Genomics 2022 23:454
    Content type: Research Published on:

  38. Brassinosteroid (BR)- signaling kinase (BSK) is a critical family of receptor-like cytoplasmic kinase for BR signal transduction, which plays important roles in plant development, immunity, and abiotic stress ...

    Authors: Yang Li, Heng Zhang, Yongxue Zhang, Yanshuang Liu, Yueyue Li, Haodong Tian, Siyi Guo, Meihong Sun, Zhi Qin and Shaojun Dai
    Citation: BMC Genomics 2022 23:453
    Content type: Research Published on:

  41. An increasing number of long noncoding RNAs (lncRNAs) have been found to play important roles in sex differentiation and gonad development by regulating gene expression at the epigenetic, transcriptional and p...

    Authors: Zhi He, Lijuan Ye, Deying Yang, Zhijun Ma, Faqiang Deng, Zhide He, Jiaxiang Hu, Hongjun Chen, Li Zheng, Yong Pu, Yuanyuan Jiao, Qiqi Chen, Kuo Gao, Jinxin Xiong, Bolin Lai, Xiaobin Gu…
    Citation: BMC Genomics 2022 23:450
    Content type: Research Published on:

  43. Progressive CO2-induced ocean acidification (OA) impacts marine life in ways that are difficult to predict but are likely to become exacerbated over generations. Although marine fishes can balance acid–base homeo...

    Authors: Mishal Cohen-Rengifo, Morgane Danion, Anne-Alicia Gonzalez, Marie-Laure Bégout, Alexandre Cormier, Cyril Noël, Joëlle Cabon, Thomas Vitré, Felix C. Mark and David Mazurais
    Citation: BMC Genomics 2022 23:448
    Content type: Research Published on:

  44. Calcineurin-like Protein (CBL) and CBL interacting protein kinase (CIPK) play a key role in plant signal transduction and response to various environmental stimuli. Quinoa, as an important plant with high nutr...

    Authors: Zhu Xiaolin, Wang Baoqiang, Wang Xian and Wei Xiaohong
    Citation: BMC Genomics 2022 23:447
    Content type: Research Published on:

  45. The cnidarian myxozoan parasite Tetracapsuloides bryosalmonae causes chronic proliferative kidney disease (PKD) in salmonids. This parasite is a serious threat to wild and cultured salmonids. T. bryosalmonae unde...

    Authors: Arun Sudhagar, Mansour El-Matbouli and Gokhlesh Kumar
    Citation: BMC Genomics 2022 23:446
    Content type: Research Published on:

  46. The majority of Genome Wide Associate Study (GWAS) loci fall in the non-coding genome, making causal variants difficult to identify and study. We hypothesized that the regulatory features underlying causal var...

    Authors: Kim Lorenz, Christopher S. Thom, Sanjana Adurty and Benjamin F. Voight
    Citation: BMC Genomics 2022 23:444
    Content type: Research Published on:

  47. Breeding a mare until she is not fertile or even until her death is common in equine industry but the fertility decreases as the mare age increases. Embryo loss due to reduced embryo quality is partly accounta...

    Authors: Emilie Derisoud, Luc Jouneau, Cédric Dubois, Catherine Archilla, Yan Jaszczyszyn, Rachel Legendre, Nathalie Daniel, Nathalie Peynot, Michèle Dahirel, Juliette Auclair-Ronzaud, Laurence Wimel, Véronique Duranthon and Pascale Chavatte-Palmer
    Citation: BMC Genomics 2022 23:443
    Content type: Research Published on:

  48. The cultivation of edible mushroom is an emerging sector with a potential yet to be discovered. Unlike plants, it is a less developed agriculture where many studies are lacking to optimize the cultivation. In ...

    Authors: Maria Luisa Tello Martín, Rebeca Lavega, Jaime Carrasco Carrasco, Margarita Pérez, Antonio J. Pérez-Pulido, Michael Thon and Ernesto Pérez Benito
    Citation: BMC Genomics 2022 23:442
    Content type: Research Published on:

  49. Brassica species include important oil crops and vegetables in the world. The R2R3-MYB gene participates in a variety of plant functions, including the activation or inhibition of anthocyanin biosynthesis. Althou...

    Authors: Daozong Chen, Haidong Chen, Guoqiang Dai, Haimei Zhang, Yi Liu, Wenjie Shen, Bo Zhu, Cheng Cui and Chen Tan
    Citation: BMC Genomics 2022 23:441
    Content type: Research Published on:

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BMC Genomics

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