From: A simple and efficient method for isolating polymorphic microsatellites from cDNA
Locus GenBank No | Repeat motif | Primer sequence (5'-3') | Allele number | Size range (bp) | Ho | He |
---|---|---|---|---|---|---|
LcaE072 | (TG)18 | CGCGGGGTTCCTCTTTCA | 4 | 196–202 | 0.17 | 0.33* |
EF210110 | GCACCTGCACAGCTACACTCT | |||||
LcaE073 | (CA)8 | CGGGTAGAAGACTGGAGGAGAG | 9 | 298–338 | 0.71 | 0.79 |
EF210111 | ACATTTTGCCACCATTTTGACTT | |||||
LcaE74 | (TG)9 | TCTGGGGGCTGGTATATTTTCCTG | 2 | 396–398 | 0.42 | 0.45 |
EF210112 | ACACATTCCACCGCTGCCATTT | |||||
LcaE075 | (TG)11 | CGCGGGATTGCCACTTTATTTT | 5 | 226–234 | 0.38 | 0.56* |
EF210113 | GAGGATGGACTTCACAGGCACAGA | |||||
LcaE076 | (TG)28 | GGGATCAGAACAAGAAAACAACC | 20 | 117–185 | 0.91 | 0.92 |
EF210114 | TAATCTAGGCACCAGGCTTCTTC | |||||
LcaE077 | (TG)7 | CCTCACTGTGTCCAAGCATC | 2 | 166–168 | 0.54 | 0.51 |
EF210115 | TCCCCCTCAATAAGTAAAAATAG | |||||
LcaE079 | (CA)13 | CCCGCCAAGGTCTCGTGTC | 3 | 186–196 | 0.25 | 0.27 |
EF210116 | CGGCAGCTGCGTGAATGTG | |||||
LcaE080 | (GA)12 | GTCGCACCAGGTTAGGAGA | 3 | 142–146 | 0.35 | 0.66* |
EF210117 | AAAAAGAGGAGCCACAGAGA | |||||
LcaE201 | (AG)13 | GGCAAGCAGCCTCGGAGAAA | 7 | 140–158 | 0.83 | 0.66 |
EF210118 | TAACGGTTTTGGAAATTGAGATGC | |||||
LcaE203 | (CT)14 | AGGCCCGAGGGTGAGCAG | 6 | 262–278 | 0.54 | 0.83* |
EF210119 | ATGCAAAGGTGCGTGTATGATTTT | |||||
LcaE205 | (CA)12 | CTGTGTCGCCTGTCGTAGTGACTG | 6 | 195–213 | 0.46 | 0.61* |
EF210120 | CATTTGCTCCCATACTGGAACTGC | |||||
LcaE206 | (CA)8 | GAAGCGGTCGAGGAAGGAATCC | 3 | 132–136 | 0.41 | 0.46 |
EF210121 | AGGCTTGGTACTTGCAGTGCTGTG | |||||
LcaE208 | (AC)10 | GTCAGGCTGGCGACCATCTCA | 3 | 176–180 | 0.44 | 0.46 |
EF210122 | CAAATTCAAACCTTTATTAACACAACTA | |||||
LcaE209 | (AC)16 | GTGTGAAACCAGGGAGCGTATG | 7 | 208–240 | 0.58 | 0.77 |
EF210123 | CCTTTGGGCAGTACTGTATTTTTC | |||||
LcaE210 | (TG)10 | TCTGTACAAGTGGCACTCCATCAT | 5 | 70–78 | 0.38 | 0.57* |
EF210124 | CAATCAAGCTTCACTGTTTTTACC | |||||
LcaE211 | (TG)20 | TTTTTGAGGGGTACAATAAGTGTG | 13 | 202–278 | 0.58 | 0.91* |
EF210125 | GAGAGCGGGATGAAGTATGAAG | |||||
LcaE014 | (TC)11 | TGGAGAATGACACAAACGAGTAAA | 6 | 256–266 | 0.58 | 0.76 |
FJ535708 | ATTTGGGTGCATAGTGAGACAGTC | |||||
LcaE015 | (CA)16 | AAGGCAAAGAGACACACACAC | 5 | 153–167 | 0.68 | 0.66 |
FJ535709 | CTCGATTCACTCTGCTCCATG | |||||
LcaE016 | (TC)8 | AGCAGCGGAGGTGGAGTCA | 4 | 258–266 | 0.87 | 0.66* |
FJ535710 | GGAGGGAGGGAGGGAGGAG | |||||
LcaE020 | (TG)10 | ACCCCACGCAAGGAGAGGATAAT | 3 | 191–195 | 0.35 | 0.36 |
FJ535711 | GCTGGCAGGCGTTGTAATGAGTT | |||||
LcaE021 | (CA)7 | CCTCAGTAATTTGGTCAAGAAACT | 3 | 144–158 | 0.44 | 0.33 |
FJ535712 | TGCAAGGACCTCTATGATACAAA | |||||
LcaE022 | (GA)10 | ACTAACCCCGTTTGGCGTCCATCT | 2 | 304–306 | 0.44 | 0.42 |
FJ535713 | TTTGGCTTCGTTGTGATCATCAGC | |||||
LcaE082 | (TC)5–(TG)8 | ATGGGGGTGGGGGTGTAACTTT | 2 | 326–328 | 0.51 | 0.50 |
FJ535714 | GCAGGGGCCCGGCTCATA | |||||
LcaE083 | (TG)23 | GTCAAGGTAAACTGCCAATAG | 3 | 154–158 | 0.47 | 0.38 |
FJ535715 | AGAGAAAATGAGAGGAAGTTAGG | |||||
LcaE098 | (CA)12 | GGGGGACAGTCAGGCAGATAGA | 3 | 202–206 | 0.52 | 0.54 |
FJ535716 | GCAGCAGATGCCTTTAACATTAGG | |||||
LcaE100 | (TG)7 | CGCGGGTGTACACTTTGTATA | 2 | 64–74 | 0.45 | 0.33 |
FJ535717 | CTCAGTGTTTCTTTCTCAATGTCA | |||||
LcaE102 | (TG)10 | CGCGGGGTTTAAGGAATGTAAG | 3 | 176–180 | 0.45 | 0.38 |
FJ535718 | AGGAAGGCCACGGTGATGG | |||||
LcaE108 | (TG)7 | GAGCAGCTGGCCGGAAAGTAAAT | 2 | 172–178 | 0.38 | 0.25 |
FJ535719 | AGGCAGCAGAGGGAAAAGAAAATA | |||||
LcaE111 | (CA)7 | AGTATACATGCCAGCAGTGTTACA | 2 | 180–192 | 0.33 | 0.33 |
FJ535720 | ATTTTTCCATCCTCGCTTCTC | |||||
LcaE118 | (CA)9 | GGCCACGACGCGTAATCACTC | 3 | 102–110 | 0.25 | 0.46* |
FJ535721 | TGCCCTGCTTCTTTTCCCTTCT | |||||
LcaE120 | (TC)9 | ACCTCCCTCCAGACCATAAACAAC | 3 | 144–160 | 0.33 | 0.35 |
FJ535722 | AAGTCAGCCACGCTATACGCTTAG | |||||
LcaE124 | (TG)15 | GGAAACAGGCTCCATCATCTTA | 2 | 166–170 | 0.46 | 0.40 |
FJ535723 | CACAACCGCTAAAGGCTATCA | |||||
LcaE12 5 | (TG)8 | AAGCAAAGCAAAGCTCGGCTCTAT | 5 | 212–220 | 0.63 | 0.76 |
FJ535724 | TGAAGGTGCTTGGCGTCAGAT | |||||
LcaE187 | (TC)14 | AAGCGCCTTTCTGTTCGTTATTC | 10 | 146–178 | 0.79 | 0.86 |
FJ535725 | TGAGGGGATCAGAAATGAAAACTC | |||||
LcaE212 | (GA)17 | TGAGGCATTTCTGAGAACCAACAC | 7 | 264–276 | 0.59 | 0.77* |
FJ535726 | AGGCTGGGCCAGATAAACACAA | |||||
LcaE218 | (TG)12 | AACAAATGTGGCAAAAAGGTCTGC | 4 | 280–288 | 0.13 | 0.20* |
FJ535727 | TTTGGGAAACTGCTCAACATCACC | |||||
LcaE223 | (CA)10 | GACCGCCCCTTCCTCTACCTGAT | 7 | 156–164 | 0.70 | 0.76 |
FJ535728 | CAAACGCAAAGCAAACACCTGAAA | |||||
LcaE241 | (CA)16 | GGAGGCCATGGAGAAGCAGATAG | 6 | 199–217 | 0.50 | 0.72 |
FJ535729 | CCTTTGGGCAGTACTGTATTTTTC | |||||
LcaE246 | (TG)7 | CGCGGGTGAGACTATTACAGA | 3 | 276–280 | 0.44 | 0.42 |
FJ535730 | CAGTGCTGCGATATGTCTATTCAT | |||||
LcaE248 | (TG)12 | CTCGGCCAGGTCTGATGAGT | 8 | 169–187 | 0.83 | 0.46* |
FJ535731 | TAATACTGACGTCGCCTCGTTC | |||||
LcaE250 | (TG)7 | GGCTCTCCCGTCTCCAGGTTT | 3 | 94–104 | 0.42 | 0.51* |
FJ535732 | CTGCGCCCTCCCATCAGTG |