Skip to main content

Table 1 Genome statistics.

From: The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota

  S. marinus H. butylicus T. pendens
Genome size (bp) 1,570,485 1,667,163 1,813,393
Coding region (bp) 1,399,012 (89.1%) 1,385,726 (83.1%) 1,651,626 (91.1%)
G+C content (bp) 561,080 (35.7%) 895,879 (53.7%) 1,045,351 (57.6%)
Total genes 1655 1668 1923
RNA genes 45 (2.7%) 52 (3.1%) 40 (2.1%)
Protein-coding genes 1610 (97.3%) 1616 (96.9%) 1883 (97.9%)
Genes with function prediction 974 (58.9%) 981 (58.8%) 1170 (60.8%)
Genes in ortholog clusters 1391 (84.0%) 1380 (82.7%) 1559 (81.1%)
Genes in paralog clusters 542 (32.7%) 488 (29.3%) 805 (41.9%)
Genes assigned to COGs 1109 (67.0%) 1114 (66.8%) 1264 (65.7%)
Genes assigned Pfam domains 1062 (64.2%) 1042 (62.5%) 1215 (63.2%)
Genes with signal peptides 37 (2.2%) 70 (4.2%) 134 (7.0%)
Genes with transmembrane helices 348 (21.0%) 294 (17.6%) 437 (22.7%)
Fusion genes 44 (2.7%) 32 (1.9%) 74 (3.8%)