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Table 3 List and description of genes transcripts strongly up-regulated by Fe deficiencya

From: Early iron-deficiency-induced transcriptional changes in Arabidopsis roots as revealed by microarray analyses

Probe ID ATG Description p-value
251620_at At3g58060 Cation efflux family protein (MTPc3) 0.001
245296_at At4g16370 Oligopeptide transporter (OPT3) 0.000
251677_at At3g56980 Basic helix-loop-helix transcription factor (BHLH039) 0.006
246998_at At5g67370 Expressed protein with unknown function 0.005
262091_at At1g56160 R2R3 transcription factor (MYB72) 0.001
254534_at At4g19680 Fe2+ transport protein (IRT2) 0.008
249535_at At5g38820 Amino acid transporter family protein 0.026
257689_at At3g12820 Myb family transcription factor (MYB10) 0.002
245692_at At5g04150 Basic helix-loop-helix transcription factor (BHLH101) 0.000
261684_at At1g47400 Expressed protein with unknown function 0.020
248028_at At5g55620 Expressed protein with unknown function 0.000
251987_at At3g53280 Cytochrome P450 monooxygenase (CYP71B5) 0.022
264751_at At1g23020 Fe3+-chelate reductase (ATFRO3) 0.008
262218_at At1g74770 Zinc finger (C3HC4-type RING finger) family protein 0.016
251545_at At3g58810 Member of the zinc transporter (ZAT) family (ATMTPa2) 0.048
248270_at At5g53450 ORG1 (OBP3-RESPONSIVE GENE 1), serine/threonine protein kinases 0.000
250828_at At5g05250 Expressed protein with unknown function 0.000
262412_at At1g34760 14-3-3 protein GF14 omicron 0.005
259228_at At3g07720 Expressed protein with unknown function and containing a kelch repeat 0.044
262217_at At1g74770 Expressed protein with unknown function and containing a Zn binding domain 0.005
251293_at At3g61930 Expressed protein with unknown function 0.044
257135_at At3g12900 2-OG-Fe2+ oxygenase family protein 0.039
252502_at At3g46900 Copper transport (COPT2) 0.012
254550_at At4g19690 Fe2+ transport protein (IRT1) 0.039
  1. a Listed are the genes that showed a significantly (p < 0.05) increased in transcript abundance in response to Fe deficiency and whose intensity was shown in Figure 3 (Cluster 6, upper part). The list was sorted (top to bottom) to corresponds to the order shown in Figure 3. Gene annotation is based on the TAIR 8.0 release of the Arabidopsis genome.