Table 5 Bioinformatics on the four highly informative SNPs.
| SNP markers | ||||
|---|---|---|---|---|
| rs29016875 | rs29015574 | rs29024867 | rs41257187 | |
| Chromosome | 10 | 9 | 4 | 1 |
| Gene candidates (NCBI-BLASTN) | ||||
| Name: |
Cytoplasmic dynein light chain (NW 001492841) | Rab3A-interacting molecule (NW_001495537) |
Collagen I, alpha2 (NW 001494859) | Integrin β5 (NW001493888) |
| Length: | 442/501 | 474/501 | 500/501 | 76/78 |
| Identity: | 96% | 99% | 99% | 98% |
| E-Value: | 9 × 10-122 | 0.00 | 0.00 | 4 × 10-32 |
| Transcription factors (TRANSFAC-BLASTX) | ||||
| No hits found |
MEF-2D (Xl; T-01771) |
Ceh-24 (S.Cb; T-03376) | No hits found | |
|
Irx-3 (Mm; T-02439) |
RAR-β3 (Mm; T-01339) | |||
