Table 2 Second level GO terms that differed when comparing QTL to the entire genome using GeneMerge.
From: QTL global meta-analysis: are trait determining genes clustered?
QTL Category | GO Code | Description | Population Frequency | QTL/Population | p value |
|---|---|---|---|---|---|
Body Conformation | GO:0044456 | synapse part | 0.00429 | 4.00155 | 0.0004 |
Body Conformation | GO:0045202 | synapse | 0.00810 | 3.06373 | 0.0004 |
Disease Resistance | GO:0022414 | reproductive process | 0.00664 | 2.31530 | 0.0030 |
Fat | GO:0040007 | growth | 0.01040 | 1.20290 | 0.0197 |
Growth | GO:0005623 | cell | 0.42688 | 1.05397 | 0.0014 |
Growth | GO:0031974 | membrane-enclosed lumen | 0.02531 | 1.24800 | 0.0070 |
Growth | GO:0044464 | cell part | 0.42683 | 1.05408 | 0.0014 |
Growth | GO:0009987 | cellular process | 0.40776 | 1.06011 | 0.0007 |
Growth | GO:0005215 | transporter activity | 0.05160 | 1.18584 | 0.0034 |
Growth | GO:0030528 | transcription regulator activity | 0.04947 | 1.15047 | 0.0161 |
Milk Protein | GO:0044421 | extracellular region part | 0.01633 | 1.21375 | 0.0196 |
Milk Yield | GO:0005623 | cell | 0.42688 | 1.04582 | 0.0041 |
Milk Yield | GO:0044464 | cell part | 0.42683 | 1.04531 | 0.0044 |
Milk Yield | GO:0009987 | cellular process | 0.40776 | 1.04050 | 0.0123 |
Milk Yield | GO:0030528 | transcription regulator activity | 0.04947 | 1.16269 | 0.0077 |
Milk Yield | GO:0043234 | protein complex | 0.07580 | 1.11389 | 0.0160 |
Reproduction | GO:0008152 | metabolic process | 0.27284 | 1.05689 | 0.0174 |
Reproduction | GO:0005488 | binding | 0.38440 | 1.06651 | 0.0007 |
Reproduction | GO:0009987 | cellular process | 0.40776 | 1.04258 | 0.0159 |
Reproduction | GO:0030528 | transcription regulator activity | 0.04947 | 1.24460 | 0.0005 |
Reproduction | GO:0043226 | organelle | 0.25103 | 1.08465 | 0.0015 |
Reproduction | GO:0005198 | structural molecule activity | 0.02566 | 1.26584 | 0.0059 |