Figure 1

Chlamydomonas central metabolism pathways and processes. (A) The Chlamydomonas central metabolism is visualized using the MapManWeb [58] visualization tool. Squares represent Chlamydomonas proteins that have been assigned into the various MapMan metabolic pathways depicted on the diagram. These are colored red if matching peptides have been found by proteomics and blue otherwise. All proteins are linked to their ChlamyCyc gene pages (1). Metabolites that have been identified experimentally are represented by white boxes. (B) Gene page for the citrate synthase gene CYS1 containing information and links to annotation data, orthologs, and metabolic reactions (2). (C) Enzymatic reaction page for reaction EC2.3.1.1 with links to pathways containing this reaction (3). (D) TCA cycle. The proteins are linked back to their corresponding protein and gene pages (4). Links between web pages are shown in green.