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Table 5 Experimental analysis of 13 randomly selected predictions that differ between the gg2v3 and FGC07 catalogs

From: Improving Gene-finding in Chlamydomonas reinhardtii:GreenGenie2

Models with alternate exon termini predicted in gg2v3 and FGC07

Novel exons predicted in gg2v3 not present in FGC07

gg2v3 Gene ID

Support for gg2v3

Support for FGC07

gg2v3 Gene ID

gg2v3 support

4t254

+

--

1t16

+

11t344

+

--

1t34

+

25t123

+

--

1t147

+

24t200

+

--

11t344

+

5t126

--

--

15t291

+

   

30t106

+

   

30t170

+

   

3t257

--

  1. +: A product of the correct size was found in samples by RT-PCR
  2. --: No product was obtained by RT-PCR
  3. *For primers see Additional files 4 and 5.