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Table 2 The overlap between KEGG pathway genes and hits/nonhits in the corresponding RNAi screen.

From: A network-based integrative approach to prioritize reliable hits from multiple genome-wide RNAi screens in Drosophila

KEGG pathway
(#genes)
All hits Experimentally validated hits Top-ranked hits All nonhits Top-ranked nonhits
(RR > 0.9)
Top-ranked nonhits
(RR > 0.8)
Hh signaling pathway (23) 9 6 9 14 7 10
Wnt signaling pathway (65) 9 8 9 56 32 48
  1. Each cell represents the overlap between KEGG pathway genes (rows) and all, or subsets of, hits/nonhits in the corresponding RNAi screen (columns). The hits/nonhits were ranked by NePhe score. The top-ranked hits (column 3) are of the same size as the experimentally validated hits (column 2).