Table 1 Summary of 454-sequencing and overlap to microarray cDNAs via pig UniGene sequence IDs
From: Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies
RNA Sample | 454 sequence count | 454 sequence count with UniGene hit | Unique UniGene sequence count | Unique UniGene sequence count with array overlap |
|---|---|---|---|---|
HEA1 | 173.571 | 79.401 | 10.567 | 6.544 |
HEA2 | 91.591 | 37.944 | 6.551 | 4.873 |
HEA3 | 286.504 | 134.455 | 12.783 | 7.426 |
Subtotal | 551.666 | 251.800 | 15.885 | 8.764 |
LDO1 | 258.307 | 142.498 | 10.116 | 6.290 |
LDO2 | 155.443 | 85.158 | 7.555 | 5.098 |
LDO3 | 287.945 | 167.637 | 9.320 | 6.384 |
Subtotal | 701.695 | 395.293 | 14.059 | 8.230 |
Total | 1.253.361 | 647.093 | 18.624 | 9.741 |
Total, N ≥ 1 | 471.028 | 2.954 | 2.541 |