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Table 1 Summary of 454-sequencing and overlap to microarray cDNAs via pig UniGene sequence IDs

From: Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies

RNA Sample 454 sequence count 454 sequence count with UniGene hit Unique UniGene sequence count Unique UniGene sequence count with array overlap
HEA1 173.571 79.401 10.567 6.544
HEA2 91.591 37.944 6.551 4.873
HEA3 286.504 134.455 12.783 7.426
Subtotal 551.666 251.800 15.885 8.764
LDO1 258.307 142.498 10.116 6.290
LDO2 155.443 85.158 7.555 5.098
LDO3 287.945 167.637 9.320 6.384
Subtotal 701.695 395.293 14.059 8.230
Total 1.253.361 647.093 18.624 9.741
Total, N ≥ 1   471.028 2.954 2.541
  1. N ≥ 1 indicates that these UniGene IDs are identified by BlastN at least once in all six RNA samples by 454-sequencing.