Figure 5

The visualization of estimated transcriptional network at the threshold of 0.015. The node in the network stands for gene. The yellow and red nodes represent heat shock proteins and transcription factors, respectively. The hub node is shown as grey and green node, respectively, at network of 37°C and 48°C. The red and blue arrows represent positive and negative regulation, respectively. The direction of arrow indicates the regulation direction, i.e., from regulator gene to regulated or target gene. The gene information corresponding to yellow node (heat shock protein): 293 (AFU1G11180), 1059 (AFU3G14540), 1465 (AFU5G04170), 1807 (AFU6G06460), 1808 (AFU6G06470). The gene information corresponding to red node (transcription factor): 723 (AFU3G02000), 909 (AFU3G09670), 1060 (AFU3G14550), 1208 (AFU4G09710), 1957 (AFU6G12160). The gene information corresponding grey and green nodes (hub nodes) : 1062 (AFU3G14590), 1172 (AFU4G08340), 1553 (AFU5G08750), 1554 (AFU5G08800), 1806 (AFU6G06430), 1289 (AFU4G12010), 1931 (AFU6G10610), 1933 (AFU6G10650), 1934 (AFU6G10660), 2038 (AFU7G00170), 2036 (AFU7G00120), 2039 (AFU7G00200), 2050 (AFU7G01000), 2077 (AFU7G01920), 2078 (AFU7G01930), 2311 (AFU8G06340), 2312 (AFU8G06350). (A) network of 37°C, (B) network of 48°C. Gene information corresponding to each node in the network is shown at additional file 3.