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Table 1 Assembly of radiata pine xylogenesis ESTs from six cDNA libraries

From: Generation and analysis of expressed sequence tags from six developing xylem libraries in Pinus radiata D. Don

Assembly EST Contig Singleton Unigene Redundancy (%) c
Assembly for six libraries a 5,952 952 2,352 3,304 47.8
Assembly for each library b      
   Juvenile earlywood 1,259 198 711 909 27.8
   Juvenile latewood 1,636 241 935 1,176 28.1
   Transition earlywood 694 92 410 502 27.7
   Transition latewood 799 73 371 444 44.4
   Mature earlywood 837 128 454 582 30.5
   Mature latewood 727 65 559 624 14.2
   Total of each library 5,952 797 3,440 4,237 28.8 d
  1. a: ESTs from the 5 ends of 5,952 clones were used in the assembly;
  2. b: Only 5 end ESTs in each library were used in the assemblies;
  3. c: Redundancy was estimated by: 1- (number of unigenes/number of ESTs);
  4. d: The average redundancy from each of six cDNA libraries.