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Table 5 Estimated haplotype block and population frequencies of the SPP1 locus.

From: Osteopontin: an early innate immune marker of Escherichia coli mastitis harbors genetic polymorphisms with possible links with resistance to mastitis

Haplotype

SPP1c.-1301G>A

SPP1c.-1251C>T

SPP1c.-430G>A

SPP1c.*40A>C

Frequencya

Frequencyb

H1

G

C

G

A

0.59230

0.599

H2

G

T

A

C

0.23976

0.252

H3

A

C

G

A

0.10267

0.105

H4

G

C

G

C

0.05079

0.045

H5

G

T

A

A

0.00704

 

H6

A

T

A

C

0.00164

 

H7

G

T

G

C

0.00125

 

H8

G

C

A

C

0.00123

 

H9

A

C

G

C

0.00107

 

H10

G

C

A

A

0.00106

 

H11

G

T

G

A

0.00104

 

H12

A

C

A

C

0.00003

 

H13

A

T

G

A

0.00003

 

H14

A

T

G

C

0.00003

 

H15

A

C

A

A

0.00003

 

H16

A

T

A

A

0.00003

 
  1. aAnalysis were performed using HAPROB [72]
  2. bAnalysis were performed using Haploview [73], version 4
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BMC Genomics

ISSN: 1471-2164

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