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Table 7 Estimated haplotype effects on EBVs for SCS.

From: Osteopontin: an early innate immune marker of Escherichia coli mastitis harbors genetic polymorphisms with possible links with resistance to mastitis

  Average haplotype substitution effect (in EBV units of score)a
Haplotypes SCS SCS1 SCS2 SCS3
Estimated haplotype effect ± SE ( P value)
H1 (GCGA) 0.118 ± 0.268 (0.660) 0.034 ± 0.261 (0.896) 0.120 ± 0.295 (0.685) 0.173 ± 0.333 (0.604)
H2 (GTAC) 0.132 ± 0.274 (0.629) 0.061 ± 0.266 (0.818) 0.136 ± 0.300 (0.650) 0.174 ± 0.340 (0.609)
H3 (ACGA) 0.169 ± 0.277 (0.541) 0.071 ± 0.270 (0.793) 0.177 ± 0.305 (0.562) 0.209 ± 0.345 (0.545)
H4 (GCGC) 0.023 ± 0.276 (0.935) 0.030 ± 0.269 (0.913) 0.025 ± 0.303 (0.933) 0.071 ± 0.343 (0.836)
H5 (GTAA) 0.212 ± 0.352 (0.547) 0.090 ± 0.339 (0.790) 0.247 ± 0.382 (0.518) 0.285 ± 0.433 (0.512)
  1. a EBVs are calculated for the respective lactation: over all (SCS), first (SCS1), second (SCS2), and third (SCS3) lactations