| |
Intacta
|
Pseudogenesb
|
Partialc
| | |
|---|
|
Species
|
α
|
γ
|
γ-c
|
θ
|
Total
|
α
|
γ
|
γ-c
|
θ
|
Total
|
α
|
γ
|
γ-c
|
θ
|
Total
|
Totald
|
% intact
OR genes
(range)e
|
|---|
|
Green anole
|
1
|
108
|
0
|
1
|
110
|
0
|
42
|
0
|
0
|
42
|
0
|
4
|
0
|
0
|
4
|
156
|
72 (71;73)
|
|
Chicken
|
9
|
39
|
165
|
1
|
214
|
6
|
26
|
79
|
0
|
111
|
2
|
11
|
141
|
0
|
154
|
479
|
66 (45;77)
|
|
Zebra finch
|
2
|
3
|
128
|
1
|
134
|
3
|
4
|
214
|
0
|
221
|
0
|
3
|
195
|
0
|
198
|
553
|
38 (24;60)
|
- a A sequence is defined as "intact" if it possesses a full-length OR protein coding sequence that is at least 250 amino-acids long and has seven TM domains.
- b A sequence is defined as "pseudogene" if it possesses at least 1 premature stop codon and/or frameshift and/or has less than seven TM domains.
- c A sequence is classified as a partial gene if it is shorter than 250 amino-acids and contains at least one sequence gap on the flanking genomic region.
- d Numbers indicate the sum of intact genes, pseudogenes and partial genes.
- e The percentage of intact OR genes is calculated as the ratio of 100*intact genes/(intact genes + pseudogenes). Numbers in brackets indicate the proportion of intact OR genes assuming that all partial genes will turn out to be pseudogenes (first number) or intact OR genes (second number).
