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Table 2 Mapping bovine CHORI-240 BAC-end sequences to the bovine genome

From: A multiway analysis for identifying high integrity bovine BACs

BAC end sequences Total % correct
position
consistent
position
correct and consistent
position
inconsistent
positions
% inconsistent
expected orientations and within size limit (tail-to-tail) 55,572 40% 3,826 46,295 50,121 2,932 5.3%
conflicting orientations and/or outside size limit same chromosome 8,666 6.2% 340 6,757 7,097 938 11%
two different chromosomes (breaks) 9,4431 6.8% 316 6,904 7,220 1,803 19%
only one BAC end placed on genome (unpaired) 64,996 47% 3,861 44,171 48,032 9,404 14%
Total 138,677 100% 8,343 104,127 112,470 15,077 11%
  1. 1does not include BACs with both end sequences mapped to the unknown chromosome